Monarch geneset OGS2.0

DPOGS211883
TranscriptDPOGS211883-TA5748 bp
ProteinDPOGS211883-PA1915 aa
Genomic positionDPSCF300011 - 775545-786480
RNAseq coverage185x (Rank: top 49%)
Annotation
HeliconiusHMEL0051660.079.01% 
BombyxBGIBMGA001256-TA0.064.75% 
DrosophilaCG8909-PB0.048.06% 
EBI UniRef50UniRef50_E0VY080.053.51%Low-density lipoprotein receptor, putative n=5 Tax=Neoptera RepID=E0VY08_PEDHC
NCBI RefSeqXP_002431002.10.053.51%low-density lipoprotein receptor, putative [Pediculus humanus corporis]
NCBI nr blastpgi|2420211360.053.51%low-density lipoprotein receptor, putative [Pediculus humanus corporis]
NCBI nr blastxgi|2420211360.053.56%low-density lipoprotein receptor, putative [Pediculus humanus corporis]
Group
Gene OntologyGO:00055151.8e-14protein binding
GO:00055091.8e-10calcium ion binding
KEGG pathwaybfo:BRAFLDRAFT_1231210.0 
 K03068 (LRP5_6)maps-> Wnt signaling pathway
InterPro domain[839-1109] IPR0110421.2e-99Six-bladed beta-propeller, TolB-like
[430-1149] IPR0090302.6e-16Growth factor, receptor
[1276-1316] IPR0000334.3e-15LDLR class B repeat
[205-242] IPR0021721.8e-14Low-density lipoprotein (LDL) receptor class A repeat
[490-531] IPR0018811.8e-10EGF-like calcium-binding
Orthology groupMCL10050 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211883-TA
ATGAAGATTCAGCTCAGGTCACTTAGAGCAGCCATCATGAAACACATCACCATGTTCCAGGCCGTCCTGATAACGGTCTATATTATAACGATACATGGACACGTTAAGGGTGAGGATGCAGTGCCACCCCAACGAACTCCCAATGGAACTGTTGAAGTACCGGACCCTCGTTCAGCCATCGGTCGCGTGCCTCCTTACCAGCCGCCTGCCATCGGGCTCCCGGGCCCCATGCAAGTCCCCGGCTTCCGACCCCACAACCCTCACACTCGAGTAGACGGCTGGCATCCAAATGGCCGCATTAGTTCCAAAGGATCCTACGTGATCGCCGATGACCTTGAAGATGACGATGACGGCGGATGTCACATATCATGCTCCAAAGAATTTTTTTCTTGTCAGACATCATGCAAATGCATACCAATGGAGAAGCGTTGCGATGGCAAAGTCGAATGTGTGGACGCTGAGGACGAGGCCGGCTGCACTCCGTCGTGCGACGAGCACGACAACCGAACGATCTGCCTCAACACCAGGGTGTGCATCGCTATCGAATGGATCTGTGACGGTGACAACGATTGCGACGATTTCTCCGATGAGACACATTGCGGAGGTGTGACGAATTGTACTTCAGATCAATTCCAATGTGGCAACGGACTGTGCATAGATAAAGACTGGGTCTGCGATGGTGCTGATGACTGTCGTGACAACTCCGACGAGATCCATTGCCCCAAAGGAAAATGCCGAGACAACCAGTTCACCTGTCTGACGGGAGAGTGTCTGGCGCTTCACTGGCGCTGTGATAAGGAAGCTGACTGTCCTGATAACTCGGACGAATCCGAATGTCCCGTGGAACTGTTACAATGCGGCGAGAATGAGATCCAGTGTAACAACAAGAAGTGTGTGAGAAAAGATTTCCAATGTGACGGTGACAACGACTGCGGCGATTGGACCGACGAGGACTCCTGTCCCGTTCTGCCCGGAAGTTGCAGTTCGTCTGAATACAAATGCAAGGATGGTAAGTGCATCCCGGAGCGTTGGAAATGCGATGCGGAGCGCGACTGTGAGGACGGTGATGATGAAGTGAGCTGTGAACCGCACGGAGTCAGGAACTGCACCGTCGACGAGTACACTTGCATTGATAGGCGATGTATATCGAAAACTTGGCTCTGCGATGGACTTAGGGATTGCAGCAATGGAGAAGATGAATTAAACTGTGAAGTATTTTGTGAGAAGGATCAATACATGTGTAAATCAATTAAAAGCGACGCATTCAGAAACTGCGTAAATAGGAAACACGTGTGTGATGGTATGAAGGACTGTCCTCAAGGAGACGACGAAGAGAAATGTCCCACAAAAAGAAAGTGCCGGCCAGATGACAAATGTGAACGACAATGCATTACAACCTTCGATGGTTTCCCAGCTTGCGCATGTCCTATTGGTTATTTGTTGGATAATAACGGTTATAGCTGCCAGGATATAGACGAGTGCATGTACGAACAAGACCCAGTTTGCTCACAAACCTGTTCAAATACCCTCGGCAGTTACATGTGTGGATGCATGACTGGTTATGTGCTGAGACCTGATGCCCGGTCCTGTAAGGCTACCGGGGAGTCACCCACTTTATTGTTTTCTAATGGTGTTGGAATACGACAGGTCTGGCTTACTGGAGAAAACTACATGTCAATTTTAAAAGGCTTACACAAAGCTATGGCTCTAGACTATCATTACAAGAAAAACCTCGTATTTTGGACTGAAAATAACATGAGAGTTATAAGAGTTGCACCGTTGGATAGTAATAATATGACGGATGTGGTTAGATGGGGTATAGAAACACCAGGTGGTTTAGCCGTGGACTGGATCCATGATCTTCTCTTCTGGACAGACTCTGGCACAAGACGAGTGGAAGTGGCCACGCTGGACGGCTCCCAGCGAGCAGTTCTAGCCGCTAGTGACGTCGACAAGCCACGAGCTATAGCTGTTCATCCCGGAGATGCTCTCGTCTTTTGGACTGATTGGGGACCTAATCCAAAAATAGAACGTGCAAATATGGACGGTGATAATCGCAAGAGCATTATAGTCCATAACATATTTTGGCCCAACGGCTTGACTATTGATTATACTGAATCCACCATTTATTGGGCCGATGCTAAGCATCATGTTATTGAAAAAGCATCCTTCAACGGTTTGGACAGGAAGCGCATTATAAACAAGGGCTTACCTCATCCATTTGCGTTAACATTGTTTGAGGACGCCATATACTGGACCGACTGGCACACGAAGAGTATTTCAACTGTCAATAAGAAAACTGGCATGGGCATGCAGACTGTCCATGCGAGTTTATATGTCCCCATGGATATACAGAGCTTCCACCCACTACGCCAGCGCTCGTATAAGAATCGTTGCGTCAACAATGGCGGCTGTTCTCACATGTGCCTCCCAGCGTCGTCTGAACGAACGTGTCGCTGTCCTGTAGGGTTCAACCTTCATTCGGACGGACGAACCTGTGAAGAAACTCCAGAGAAGTTACTTCTCTATGCTCATCGGAAGGATATACGACTTAAGCAATTAAATCCACGAAAGCACATGGACTCCTTGGATATGGTTATACCAGTTGAAAATATTAAGTCCGCTGTAGCTCTAGACTGGGATCACAACAGCAATTCTATATTTTGGACTGATGTAGAAAAGGACACGATTAATAAAGCCTTCTTGAATGGTTCTCATCAAACTATTATTGTTGGCTCAAACTTAATATCCCCAGCCGGACTTGCTTATGATTGGCTAACAAATAAATTATATTGGACCGACGCCGGCACTAACAGGATTGAAGTAGCAAATGCAAATGGTAGCATGCGGACCCTGTTGGCTTGGGAAAATATTGACAAACCTAGAGATATAGTGCTTGATCCAATCGGTGGTATAATGTATTGGTCCGATTGGGGCTCTTCGCCCTGCATTGAGCGCGCAGATATGGATGGTGGCAATAGACAACGTCTCATCTTTGGTGACATGACGTGGCCGAATGGCCTTGCGCTTGATTTACCAAACAAACGCATATATTGGACCGATGGTGGTAATCGTACCATTGAATATGCTAATCTAGATGGCACTGGTCGTACTGTTTTAATAGGTCAAGATCTAACACATCCTTTTGGACTTGATTTATACGGTGATGAGGTATTTTGGACCGACTGGAACACCCAGTCCATCCAAGCCGCAAACAAGTATACTGGAAAACAAAGGAGAACATTAGGAGCTGGTGTCGAAGGACTTATGGATGTGAGGGTATTTCACAAGGAACGGATGAGCAGTAGAAATCCCTGCAGTAATAATAACGGCGGCTGTTCACACTTATGTTTATTAAAACCAATGGGGCGGAGTTGCGCTTGTCCTATTGGTATTAAATTAAGCAATGACGGCAGAATTTGTACGAATGGACCAATCAACTTCTTAATCTTTGCTCATCGCGTTGATATACGTATTGTGTCTTTAGATGTACCGTACCTTGTCGATGTTGTTCTACCGTTACCTGCTCTAAAGAATGCTCTTGGAGTTGACGTTGACCAGAGAACTGGACTTATATATTGGACTGACACCGGGGAACGCAAAATAAAACGGGCTAACAAAGAAGGTCATCAAAATGAAACTATCATTGGACGAGGTCTTCATACTGCTGATGGAATAGCTATTGATTCAGCCGGGCGAAAGATTTATTGGACTGACGGTGGAAGAAATAGTATCGAAGTTGCAGAACTTAACGGCACAAATAGAAAAGTTCTTGTGTGGACTGGGTTAGATTCTCCGCGAGCTATAGCATTGCATTACGATTACGGCTTTATGTTTTGGTCTGATTGGGGAACTTCAGCGAAAATCGAGAGAGCTGACATGGACGGGAAAAACAGACGAATTATTGTCGATAACAACATCAAGTGGCCGAACGGACTAGCCATCGACAGAATTGAAAGTCGTCTGTACTGGAATGACGCCAAGGTTTTGACAATAGAAAGCTCAAACTTTAATGGACACGACCGTCGCACTCTTCTCACTCAGGTACCTTATCCGTATGGCATCGTGATCGTCGGACAACACATTTATTGGACTGATTGGAAGACAAAAGCATTGCATAGAGCAGACAAGTCCAATGGAAGAGAACAATTGAAGATAAGGGAAAATCTTGAAGGACTTATGGACATAAGAGCTATACAGGGCGATCACATTTTAGAAAACGCTTGTGGAAAAAATAATGGTGGTTGTTCTCACCTCTGTTTACGCTCGCCCCAAGGTTACACGTGTGCGTGTCCGACAGGATTATTATTTAAGAATGAGTCGGAACTTAATCCTAAAACATGTAAGAAACATCCCGATAATTTCCTTGTATTCGCCGCCAGAGGAAGTATTGCATTGATATCACTAGACACTCCTGAGCAGTGGGATATTACGTTGCCAGTCAAGGATATACAAAACTCAGTTGCCGTGGATTATCATTGGGAACGGAAATTGATATTCTTCACGGATGTCTATCATAATGAGATACGATCAATAGACATGGAAAACATGAGCGATTCCAGAGTCATCGTGAACACTGGCCTTGACACACCTAATGGATTGGGAGTGGACTGGATTGCGAATAACATCTACTGGACCGATAATGACTTCAAGGTCGTGGAAGTAGCAAGACTTGATGGTTCATCAAGAAAAACTCTTATTACTGGCCTTACGGAACCTAGAGCTTTGGCTTTATTCCCTGCTAAGGGTTTCCTATACTGGAGTGACTGGGGTGAGAGTCCTAACATTGAAAGAGCTTCTTTGGATGGTAGTCAAAGAAGAATTATAGTGAATCATGACTTAGGCTTTCCCAACGGCATAACAATTGATTATAAAGACAGGCGACTTTACTGGACAGATGCTCTAAAAGACAGAATTGACACGTCTGATTTGAACGGTCAGCATAGGGTTCAACTTATACCTGAAGCTAAGAATCCATTTGGAATGACTCAGTTTAATAACTACATTTATTGGACCGATTGGTATAAAAAATCAGTGATGAGAGCAGATAAGAGAACTGGTAAAAACGTGACGGCAATACGAACGGATTTAGAGATGGTCATGGAAATTAAAGCTGTGTCTTCTGAGAAACAACACGGTTGGAACCCATGCAAGGAAGATAACGGAGGATGCTCACATTTGTGTTTGTTTAGAGGACATGATTACGTTTGCGCTTGTCCAGATGCTTTTGATGACAAAGTTTGCTCAACGACTCCAAAACTCCGCGTTGATTTACGAATGCCAGCACACTACCCTTCATTCTACGACTACATGGACATCGAGATCGGTAACAAAATTGCAATGCATCCCACAACAGCGCCATCCACTAATATCGGAAGTATTGTAATTGGAGTGGCAGTTGCAGTTTTTATAATTCTTGCGATATTAACAACTGCTTTTGTATGCTTTAAAATGCGACGCAATCGAGACGGTGAGATAAAGGAAAACTACCGCGAGTCAAGCGGACACATTTCCTTCCATAATCCCAATTACAGCTGTGCTACGATGGTAGGAGAACCCGCGGAGAGAAGGCAGAATAGGTTCCAGGGTATATTCAAATACGATAAAAGTCAGGGGCGTGTAACTAACGTATACATGCCGGAGGGCACGAGCCTACTACCACCAGCGCCTCCTCCACCCCCACACCGAGTCCCTCCACGACCAGCAAACGATGACTTCGAACCTGTCACTCTACACCCATTCGCTTGA

Protein sequence:

>DPOGS211883-PA
MKIQLRSLRAAIMKHITMFQAVLITVYIITIHGHVKGEDAVPPQRTPNGTVEVPDPRSAIGRVPPYQPPAIGLPGPMQVPGFRPHNPHTRVDGWHPNGRISSKGSYVIADDLEDDDDGGCHISCSKEFFSCQTSCKCIPMEKRCDGKVECVDAEDEAGCTPSCDEHDNRTICLNTRVCIAIEWICDGDNDCDDFSDETHCGGVTNCTSDQFQCGNGLCIDKDWVCDGADDCRDNSDEIHCPKGKCRDNQFTCLTGECLALHWRCDKEADCPDNSDESECPVELLQCGENEIQCNNKKCVRKDFQCDGDNDCGDWTDEDSCPVLPGSCSSSEYKCKDGKCIPERWKCDAERDCEDGDDEVSCEPHGVRNCTVDEYTCIDRRCISKTWLCDGLRDCSNGEDELNCEVFCEKDQYMCKSIKSDAFRNCVNRKHVCDGMKDCPQGDDEEKCPTKRKCRPDDKCERQCITTFDGFPACACPIGYLLDNNGYSCQDIDECMYEQDPVCSQTCSNTLGSYMCGCMTGYVLRPDARSCKATGESPTLLFSNGVGIRQVWLTGENYMSILKGLHKAMALDYHYKKNLVFWTENNMRVIRVAPLDSNNMTDVVRWGIETPGGLAVDWIHDLLFWTDSGTRRVEVATLDGSQRAVLAASDVDKPRAIAVHPGDALVFWTDWGPNPKIERANMDGDNRKSIIVHNIFWPNGLTIDYTESTIYWADAKHHVIEKASFNGLDRKRIINKGLPHPFALTLFEDAIYWTDWHTKSISTVNKKTGMGMQTVHASLYVPMDIQSFHPLRQRSYKNRCVNNGGCSHMCLPASSERTCRCPVGFNLHSDGRTCEETPEKLLLYAHRKDIRLKQLNPRKHMDSLDMVIPVENIKSAVALDWDHNSNSIFWTDVEKDTINKAFLNGSHQTIIVGSNLISPAGLAYDWLTNKLYWTDAGTNRIEVANANGSMRTLLAWENIDKPRDIVLDPIGGIMYWSDWGSSPCIERADMDGGNRQRLIFGDMTWPNGLALDLPNKRIYWTDGGNRTIEYANLDGTGRTVLIGQDLTHPFGLDLYGDEVFWTDWNTQSIQAANKYTGKQRRTLGAGVEGLMDVRVFHKERMSSRNPCSNNNGGCSHLCLLKPMGRSCACPIGIKLSNDGRICTNGPINFLIFAHRVDIRIVSLDVPYLVDVVLPLPALKNALGVDVDQRTGLIYWTDTGERKIKRANKEGHQNETIIGRGLHTADGIAIDSAGRKIYWTDGGRNSIEVAELNGTNRKVLVWTGLDSPRAIALHYDYGFMFWSDWGTSAKIERADMDGKNRRIIVDNNIKWPNGLAIDRIESRLYWNDAKVLTIESSNFNGHDRRTLLTQVPYPYGIVIVGQHIYWTDWKTKALHRADKSNGREQLKIRENLEGLMDIRAIQGDHILENACGKNNGGCSHLCLRSPQGYTCACPTGLLFKNESELNPKTCKKHPDNFLVFAARGSIALISLDTPEQWDITLPVKDIQNSVAVDYHWERKLIFFTDVYHNEIRSIDMENMSDSRVIVNTGLDTPNGLGVDWIANNIYWTDNDFKVVEVARLDGSSRKTLITGLTEPRALALFPAKGFLYWSDWGESPNIERASLDGSQRRIIVNHDLGFPNGITIDYKDRRLYWTDALKDRIDTSDLNGQHRVQLIPEAKNPFGMTQFNNYIYWTDWYKKSVMRADKRTGKNVTAIRTDLEMVMEIKAVSSEKQHGWNPCKEDNGGCSHLCLFRGHDYVCACPDAFDDKVCSTTPKLRVDLRMPAHYPSFYDYMDIEIGNKIAMHPTTAPSTNIGSIVIGVAVAVFIILAILTTAFVCFKMRRNRDGEIKENYRESSGHISFHNPNYSCATMVGEPAERRQNRFQGIFKYDKSQGRVTNVYMPEGTSLLPPAPPPPPHRVPPRPANDDFEPVTLHPFA-