DPOGS211910 | ||
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Transcript | DPOGS211910-TA | 480 bp |
Protein | DPOGS211910-PA | 159 aa |
Genomic position | DPSCF300011 - 94150-94717 | |
RNAseq coverage | 22450x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL017706 | 1e-85 | 94.34% |   |
Bombyx | BGIBMGA001106-TA | 7e-86 | 94.97% |   |
Drosophila | RpL21-PA | 2e-68 | 71.70% |   |
EBI UniRef50 | UniRef50_P46778 | 2e-58 | 66.88% | 60S ribosomal protein L21 n=520 Tax=Eukaryota RepID=RL21_HUMAN |
NCBI RefSeq | NP_001037223.1 | 2e-84 | 94.97% | ribosomal protein L21 [Bombyx mori] |
NCBI nr blastp | gi|315115431 | 1e-83 | 96.23% | ribosomal protein L21 [Euphydryas aurinia] |
NCBI nr blastx | gi|315115431 | 5e-84 | 96.23% | ribosomal protein L21 [Euphydryas aurinia] |
Group | ||||
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Gene Ontology | GO:0005840 | 1.8e-145 | ribosome | |
GO:0006412 | 1.8e-145 | translation | ||
GO:0005622 | 1.8e-145 | intracellular | ||
GO:0003735 | 1.8e-145 | structural constituent of ribosome | ||
KEGG pathway | tca:663013 | 1e-70 |   | |
  | K02889 (RP-L21e, RPL21) | maps-> | Ribosome | |
InterPro domain | [2-159] IPR001147 | 1.8e-145 | Ribosomal protein L21e | |
[2-100] IPR008991 | 1.9e-35 | Translation protein SH3-like | ||
Orthology group | MCL12177 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211910-TA
ATGACGAACTCCAAAGGTTACCGCCGTGGAACCAGGGACTTGTTCGCCCGCAGGTTCCGTACCCATGGCACCATCCCTCTATCTACTTATATGAAAGTATACAAAGTCGGTGACATCGTCGACATTAGGGGCAATGGTGCAGTCCAAAAGGGTATGCCACACAAAGTTTACCACGGAAAGACCGGTCGAGTGTACAACGTCACAGCTCACGCTCTTGGAGTCATCGTGAACAAGAAGGTTGGTGGAAGGATCATCCCCAAGAGGATCAACATCCGCATTGAACACGTCAAGCACTCCAAGTGCCGAGAGGACTTCCTCAAGCGTGTGAAGGAAAACGAGAGGTTGCTAAAGGAAGCCAAGGCTGCCGGAAAGGTCATAAACCTCAAGAGACAACCACAGCCCCCAAGGGCTGCCCACATTGTCAGCGGTACAGAGAAACCAGTCCTGCTCGCTCCTATTCCATACGAGTTTGTAGCCTAA
>DPOGS211910-PA
MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKKVGGRIIPKRINIRIEHVKHSKCREDFLKRVKENERLLKEAKAAGKVINLKRQPQPPRAAHIVSGTEKPVLLAPIPYEFVA-