| DPOGS211935 | ||
|---|---|---|
| Transcript | DPOGS211935-TA | 420 bp |
| Protein | DPOGS211935-PA | 139 aa |
| Genomic position | DPSCF300011 + 412817-413432 | |
| RNAseq coverage | 612x (Rank: top 21%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005335 | 4e-66 | 82.01% | |
| Bombyx | BGIBMGA000882-TA | 1e-58 | 74.63% | |
| Drosophila | mRpL27-PA | 2e-48 | 62.41% | |
| EBI UniRef50 | UniRef50_Q86BM8 | 2e-46 | 62.41% | Mitochondrial ribosomal protein L27 n=13 Tax=Endopterygota RepID=Q86BM8_DROME |
| NCBI RefSeq | XP_002003395.1 | 9e-50 | 66.92% | GI17889 [Drosophila mojavensis] |
| NCBI nr blastp | gi|87248177 | 3e-56 | 72.66% | ribosomal protein L27 [Bombyx mori] |
| NCBI nr blastx | gi|87248177 | 1e-56 | 72.66% | ribosomal protein L27 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 7.2e-36 | ribosome | |
| GO:0006412 | 7.2e-36 | translation | ||
| GO:0005622 | 7.2e-36 | intracellular | ||
| GO:0003735 | 7.2e-36 | structural constituent of ribosome | ||
| KEGG pathway | tna:CTN_1037 | 6e-12 | ||
| K02899 (RP-L27, rpmA) | maps-> | Ribosome | ||
| InterPro domain | [21-138] IPR001684 | 7.2e-36 | Ribosomal protein L27 | |
| Orthology group | MCL14479 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS211935-TA
ATGTCTTGGAACTACCTTTTAAACGCGAAAAAAACTAATACACCGGTAATAGAAATTTTGCGCTACGCTAGTAAAAAGACTGGAGGAAGTACAAAGAACACTAATTGTAAAGTGAAACCCAAGCATAGAGGTTGGAAAGTTCAGGATGGTCATTTTGTTCAGACTGGTCATATGCTGGCTACTCAGCTGACTTCTAGATTCCACCCTGGTTTAAATGTGGGTATGGGTAGAAATGGAACACTGTTTGCAATCACACCTGGCAAGGTTGTGGTGACATGTGAGAAGTTTGAACCGAATTGGGATCACACCTGGGTGAAAAGAATCTATGGTGGTCGTGAACAACAGACTATATTCAAGAAATATTTCAATGTCATACCAGAACCGCAGCACAACAGATTTAAATTGGTAGATGAAGTGTAA
>DPOGS211935-PA
MSWNYLLNAKKTNTPVIEILRYASKKTGGSTKNTNCKVKPKHRGWKVQDGHFVQTGHMLATQLTSRFHPGLNVGMGRNGTLFAITPGKVVVTCEKFEPNWDHTWVKRIYGGREQQTIFKKYFNVIPEPQHNRFKLVDEV-