DPOGS211935 | ||
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Transcript | DPOGS211935-TA | 420 bp |
Protein | DPOGS211935-PA | 139 aa |
Genomic position | DPSCF300011 + 412817-413432 | |
RNAseq coverage | 612x (Rank: top 21%) |
Annotation | ||||
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Heliconius | HMEL005335 | 4e-66 | 82.01% |   |
Bombyx | BGIBMGA000882-TA | 1e-58 | 74.63% |   |
Drosophila | mRpL27-PA | 2e-48 | 62.41% |   |
EBI UniRef50 | UniRef50_Q86BM8 | 2e-46 | 62.41% | Mitochondrial ribosomal protein L27 n=13 Tax=Endopterygota RepID=Q86BM8_DROME |
NCBI RefSeq | XP_002003395.1 | 9e-50 | 66.92% | GI17889 [Drosophila mojavensis] |
NCBI nr blastp | gi|87248177 | 3e-56 | 72.66% | ribosomal protein L27 [Bombyx mori] |
NCBI nr blastx | gi|87248177 | 1e-56 | 72.66% | ribosomal protein L27 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005840 | 7.2e-36 | ribosome | |
GO:0006412 | 7.2e-36 | translation | ||
GO:0005622 | 7.2e-36 | intracellular | ||
GO:0003735 | 7.2e-36 | structural constituent of ribosome | ||
KEGG pathway | tna:CTN_1037 | 6e-12 |   | |
  | K02899 (RP-L27, rpmA) | maps-> | Ribosome | |
InterPro domain | [21-138] IPR001684 | 7.2e-36 | Ribosomal protein L27 | |
Orthology group | MCL14479 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211935-TA
ATGTCTTGGAACTACCTTTTAAACGCGAAAAAAACTAATACACCGGTAATAGAAATTTTGCGCTACGCTAGTAAAAAGACTGGAGGAAGTACAAAGAACACTAATTGTAAAGTGAAACCCAAGCATAGAGGTTGGAAAGTTCAGGATGGTCATTTTGTTCAGACTGGTCATATGCTGGCTACTCAGCTGACTTCTAGATTCCACCCTGGTTTAAATGTGGGTATGGGTAGAAATGGAACACTGTTTGCAATCACACCTGGCAAGGTTGTGGTGACATGTGAGAAGTTTGAACCGAATTGGGATCACACCTGGGTGAAAAGAATCTATGGTGGTCGTGAACAACAGACTATATTCAAGAAATATTTCAATGTCATACCAGAACCGCAGCACAACAGATTTAAATTGGTAGATGAAGTGTAA
>DPOGS211935-PA
MSWNYLLNAKKTNTPVIEILRYASKKTGGSTKNTNCKVKPKHRGWKVQDGHFVQTGHMLATQLTSRFHPGLNVGMGRNGTLFAITPGKVVVTCEKFEPNWDHTWVKRIYGGREQQTIFKKYFNVIPEPQHNRFKLVDEV-