Monarch geneset OGS2.0

DPOGS211942
TranscriptDPOGS211942-TA1857 bp
ProteinDPOGS211942-PA618 aa
Genomic positionDPSCF300011 + 806138-815028
RNAseq coverage5x (Rank: top 88%)
Annotation
HeliconiusHMEL0077071e-7374.86% 
BombyxBGIBMGA000891-TA2e-6673.12% 
DrosophilaCG8916-PB2e-8640.57% 
EBI UniRef50UniRef50_E0X9H59e-16360.10%Ionotropic GABA-aminobutyric acid receptor GRD n=7 Tax=Endopterygota RepID=E0X9H5_BOMMO
NCBI RefSeqNP_001182633.12e-16360.10%ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
NCBI nr blastpgi|3076119333e-16260.10%ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
NCBI nr blastxgi|3076119335e-16460.49%ionotropic GABA-aminobutyric acid receptor GRD [Bombyx mori]
Group
Gene OntologyGO:00160217.2e-84integral to membrane
GO:00068117.2e-84ion transport
GO:00160203.9e-40membrane
GO:00052167.5e-06ion channel activity
GO:00048907.5e-06GABA-A receptor activity
KEGG pathway 
InterPro domain[361-616] IPR0062017.2e-84Neurotransmitter-gated ion-channel
[375-611] IPR0060293.9e-40Neurotransmitter-gated ion-channel transmembrane domain
[378-398] IPR0060287.2e-30Gamma-aminobutyric acid A receptor
[186-197] IPR0013907.5e-06Gamma-aminobutyric-acid A receptor, alpha subunit
Orthology groupMCL16211 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211942-TA
ATGTTACAACTGCAATTTATACTCGAGAAGTACCTGCCCTACCTCGGGCACGTTCTGATGGCCGTGGGCTACGCCCTGGAGCAGTTTCAAAATATAGAGCCACCGCTGCCGAGTGCCATGGTACTGCTGGGACATCTCTGTGTTCTAACGGATCCCGTTATCTTATCACCGAGCCACCCCTATGTTCAGATCGTCAACCTCTTATTTCTTCTGAGCAACATCTTCATGTTCTTCTATGATCTGTTCAGAGCCGTAGAACGCAATTCTTCCGTCATGGATATGAACAGTTCGGTATTTTTAAGCATCAATCAAGCTGAAGCGAAGGGAGCCATCTACTTGACAACTAAGAATGGAACGTTCCCAATAATGTTGACGTCTTTTAAGTCCCACGACACCGCAGCGGAAGACGCAGAGATTTTATCCGCTAAAAATCTGACAAGACAAAACTGGGATGACGGAGCGGAGATGTTTTCGAATTACGCCAACGATACCTACGACTACGATACAGAAGTCTGGAAAATCAACAGGAAGAGGAGCATTAATGACGCTGTATCCAAAAACATTACCATGGTTTTGGAAAATCTATTGAAGAACTATGAAAATTCCCAGCTTCCAACTCACGGGAAAGTTTATAAGTGGGTGAGTCAATCTGGCTTACTATTGGGCGTAATGGAACATCTTGCAAGTAAACGGTTACTTTGTCATCTTATTAGACAACATCGGTCGGATGCACGGCAGTTAGATTTTGAAATTGATGTTCTGAGTTACGAAATCGAAAAATGTTTGTCAAAGACAGATTGGCAAAAATGTTTTGATATTATTAATAAACGTGAACAATTCACGTATAATCAATTGAAAAATAATAAAATTAATAAATTTAAAAAATTAACGGAAAAAATTAAAAGTTGTAATAGTAATGGCAATAATTATAATATTAATTTAAGTCGGGCAACACAAACATCGGTAACTGTTGTCAATCTGTCAAAACAAACTTTAGATAAAGAAACCGTTGAGATCCTTAAAAAAGGATTGAATTTTGCACCAGTGCCATCAAAATTACCGTTCGAAGACATTATCTGTGACTTTTCTGTCCTCCAAGTATCTTTCAACCTGAAGCGACACACGGGGTATTTTCTCATTCAAGTGTACGTGCCCTGCATACTCATAGTGGTACTATCATGGGTATCCTTCTGGATTCACAGAGAGGCGACATCAGACCGCGTGGGACTCGGCATCACGACCGTTTTAACTCTGTCAACAATCAGCTTGGACTCACGCACAGATCTTCCGAAGGTGCGTTACGCCACTGCACTCGACTGGTTTCTTTTGATGAGCTTCTTCTATTGTATCGCTACACTGCTTGAGTTTGCTGGTGTACACTATTTTACAAAGGTCGGTTCCGGCGAAATAGTGATTGATGATTCAGAGTGGGAAGACTTGATCGAGGAGGTTGGTGGTGACGCCTTCGCAGCGAGACAGCTGGCTGTGAGGAGACGAAGTTCCGCCAGATCTTCAAATAACTTTAGTATGCCCGGCGTATCAGACAATGAAGGCGAAATGCAGGACCAGCAATCAGTTCGTCTGACGATGGAGCGCACCACGCAGACAGAGGTGCGGGTGCCTCACTGGAGACAACTGCTGTACTGTCTAGCAGGAGACGATCAATATAGAAGGCAGCGGCAAAGAGAAGCTGGGAACCGCGGCCACATCAACAGTGTGTCCCACATAGACCGGGCGGCCCGGGTCCTGTTCCCGGCCTCATTCGCCCTCCTTAACCTCTTCTACTGGATGATCTACGCCTTCTCCAACGAGGACTTCGCGTGGAGCGACCATCCCATCAATACTCTCTCTCATTAG

Protein sequence:

>DPOGS211942-PA
MLQLQFILEKYLPYLGHVLMAVGYALEQFQNIEPPLPSAMVLLGHLCVLTDPVILSPSHPYVQIVNLLFLLSNIFMFFYDLFRAVERNSSVMDMNSSVFLSINQAEAKGAIYLTTKNGTFPIMLTSFKSHDTAAEDAEILSAKNLTRQNWDDGAEMFSNYANDTYDYDTEVWKINRKRSINDAVSKNITMVLENLLKNYENSQLPTHGKVYKWVSQSGLLLGVMEHLASKRLLCHLIRQHRSDARQLDFEIDVLSYEIEKCLSKTDWQKCFDIINKREQFTYNQLKNNKINKFKKLTEKIKSCNSNGNNYNINLSRATQTSVTVVNLSKQTLDKETVEILKKGLNFAPVPSKLPFEDIICDFSVLQVSFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKVRYATALDWFLLMSFFYCIATLLEFAGVHYFTKVGSGEIVIDDSEWEDLIEEVGGDAFAARQLAVRRRSSARSSNNFSMPGVSDNEGEMQDQQSVRLTMERTTQTEVRVPHWRQLLYCLAGDDQYRRQRQREAGNRGHINSVSHIDRAARVLFPASFALLNLFYWMIYAFSNEDFAWSDHPINTLSH-