DPOGS211977 | ||
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Transcript | DPOGS211977-TA | 612 bp |
Protein | DPOGS211977-PA | 203 aa |
Genomic position | DPSCF300011 + 1341814-1342688 | |
RNAseq coverage | 460x (Rank: top 27%) |
Annotation | ||||
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Heliconius | HMEL018049 | 5e-90 | 73.89% |   |
Bombyx | BGIBMGA000924-TA | 4e-83 | 69.46% |   |
Drosophila | mRpL22-PA | 2e-68 | 63.83% |   |
EBI UniRef50 | UniRef50_Q2F5Y7 | 3e-70 | 62.56% | Ribosomal protein L22 n=1 Tax=Bombyx mori RepID=Q2F5Y7_BOMMO |
NCBI RefSeq | XP_001992746.1 | 8e-69 | 60.00% | GH24048 [Drosophila grimshawi] |
NCBI nr blastp | gi|87248355 | 8e-70 | 62.56% | ribosomal protein L22 [Bombyx mori] |
NCBI nr blastx | gi|87248355 | 5e-69 | 62.56% | ribosomal protein L22 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0015934 | 3.3e-53 | large ribosomal subunit | |
GO:0006412 | 3.3e-53 | translation | ||
GO:0003735 | 3.3e-53 | structural constituent of ribosome | ||
GO:0005840 | 4.7e-30 | ribosome | ||
GO:0005622 | 4.7e-30 | intracellular | ||
KEGG pathway | smd:Smed_0991 | 4e-10 |   | |
  | K02890 (RP-L22, rplV) | maps-> | Ribosome | |
InterPro domain | [38-203] IPR005727 | 3.3e-53 | Ribosomal protein L22, bacterial-type | |
[61-170] IPR001063 | 4.7e-30 | Ribosomal protein L22/L17 | ||
Orthology group | MCL12227 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211977-TA
ATGAATAATATTTTTAAAAACTTGTTGAGCATTGGCTATTCTTGTAACCTTAAAAGTAACCTACACACTTCTCAATTACGTTTTGCTTGGAGCAAAGATAACTTACCGAAAAGATTTTTAGAATACAATAAAAAGATTTACCCTCCACAAGAAATCGGCGAAGAGCCAAGACCTGCTTTTGTATGTCATCAGAAGACTAATATAAAGTATAGCCCTGAGAAACTGTGGTACATAGCAGTGTTTATCAGGGGAATGACCATTGATGAAGCTCTCAAACAGTTGAGTTTTGTTAACAAGAAAGGTGCTGGATTTGTTAGAGATACCATACTGGAAGCACAAAACCTGGCCATTACTGAACACAATGTTGAATTTAAAAGCAATCTCTGGATTGCTGAATCCTTCTCTGGCAAGGGGACAGTGATCAAAGGAGTCCGAAGACATGCAAGAGGTAGAATGGGAGAAGTGAGATACCAGTACAGTCATTATTTTGTTAGATTAGAAGAAGGGAAGCCTCCCAAAGATTATTATAACCTGAACCCGCTCACACCGCAGCAGCAACTGGACAAGTGGTTAGAGAATATGAGGGAACGGAAAATTATAAATTCATATTAA
>DPOGS211977-PA
MNNIFKNLLSIGYSCNLKSNLHTSQLRFAWSKDNLPKRFLEYNKKIYPPQEIGEEPRPAFVCHQKTNIKYSPEKLWYIAVFIRGMTIDEALKQLSFVNKKGAGFVRDTILEAQNLAITEHNVEFKSNLWIAESFSGKGTVIKGVRRHARGRMGEVRYQYSHYFVRLEEGKPPKDYYNLNPLTPQQQLDKWLENMRERKIINSY-