DPOGS211996 | ||
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Transcript | DPOGS211996-TA | 1059 bp |
Protein | DPOGS211996-PA | 352 aa |
Genomic position | DPSCF300692 + 4498-9772 | |
RNAseq coverage | 49x (Rank: top 70%) |
Annotation | ||||
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Heliconius | HMEL002541 | 0.0 | 90.03% |   |
Bombyx | BGIBMGA003901-TA | 0.0 | 96.31% |   |
Drosophila | ATPsyn-beta-PA | 0.0 | 89.14% |   |
EBI UniRef50 | UniRef50_Q05825 | 1e-180 | 89.14% | ATP synthase subunit beta, mitochondrial n=3850 Tax=root RepID=ATPB_DROME |
NCBI RefSeq | XP_002432207.1 | 0.0 | 89.74% | ATP synthase subunit beta, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|242023574 | 0.0 | 89.74% | ATP synthase subunit beta, putative [Pediculus humanus corporis] |
NCBI nr blastx | gi|242023574 | 1e-175 | 89.74% | ATP synthase subunit beta, putative [Pediculus humanus corporis] |
Group | ||||
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Gene Ontology | GO:0045261 | 1.8e-268 | proton-transporting ATP synthase complex, catalytic core F(1) | |
GO:0015986 | 1.8e-268 | ATP synthesis coupled proton transport | ||
GO:0008553 | 1.8e-268 | hydrogen-exporting ATPase activity, phosphorylative mechanism | ||
GO:0046933 | 1.8e-268 | hydrogen ion transporting ATP synthase activity, rotational mechanism | ||
GO:0005524 | 1.4e-63 | ATP binding | ||
GO:0015991 | 2.6e-51 | ATP hydrolysis coupled proton transport | ||
GO:0033178 | 2.6e-51 | proton-transporting two-sector ATPase complex, catalytic domain | ||
GO:0016820 | 2.6e-51 | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | ||
GO:0000166 | 3.1e-06 | nucleotide binding | ||
GO:0017111 | 3.1e-06 | nucleoside-triphosphatase activity | ||
KEGG pathway | phu:Phum_PHUM576810 | 0.0 |   | |
  | K02133 (ATPeF1B, ATP5B) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [1-352] IPR005722 | 1.8e-268 | ATPase, F1 complex, beta subunit | |
[10-230] IPR000194 | 1.4e-63 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | ||
[233-350] IPR024034 | 1.2e-55 | ATPase, F1 complex beta subunit/V1 complex, C-terminal | ||
[233-350] IPR000793 | 2.6e-51 | ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal | ||
[23-293] IPR003593 | 3.1e-06 | ATPase, AAA+ type, core | ||
Orthology group | MCL10269 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211996-TA
ATGTCCGTGGAACAGGAGATATTGGTGACGGGCATCAAAGTTGTCGATCTTCTGGCCCCTTACGTAAAAGGTGGCAAAATCGGTCTATTCGGTGGCGCTGGCGTCGGGAAAACGGTTCTGATCATGGAACTCATCAATAACGTAGCCAAGGCCCACGGTGGATTTTCGGTTTTCGCCGGAGTCGGTGAACGGACCCGAGAAGGCAATGATCTCTACAACGAGATGAAAGTCGGCGGTGTCATAAAAGAAGATTACAAAACATCAAAAGTGGCGCTAGTGTACGGCCAGATGAACGAGCCCCCGGGAGCCAGAGCTCGTGTCGCCCTCACTGGGTTGACCCTCGCCGAGCACTTTAGGGACAAGGAAGGACAGGATGTGCTGCTGTTCGTTGATAACATCTTCAGATTCACTCAAGCCGGTTCCGAGGTGTCAGCGTTACTGGGTCGTATACCATCCGCCGTGGGCTACCAGCCGACTCTCGCTACTGATATGGGCACCATGCAGGAGAGAATCACGACGACTAAGACAGGATCTATAACCAGTGTCCAGGCGGTGTATGTGCCAGCTGATGACCTAACCGATCCAGCGCCAGCCACCACCTTCGCTCATCTCGACGCCACCACGGTACTATCTCGTGCTATCGCCGAGCTTGGTGTCTATCCAGCCGTGGATCCACTAGACTCCACATCCAGAGTAATGGACCCGAATATCATTGGAGCGGAGCATTACGGAGTGGCGAGAGGAGTGCAGAAGATATTACAAGACTACAAGTCGTTACAAGACATCATTGCCATCTTGGGCATGGATGAACTGTCTGAGGATGATAAGCTGACTGTTGCGAGGGCGAGGAAGATCCAGCGGTTTCTATCGCAGCCCTTCCAGGTGGCAGAAGTGTTTACAGGTCACATCGGTAAGATGGTCAAATTGGAAGAGACCATTAAAGGATTCAAAAGGATTCTGATGGGTGAGTTGGACCACATCCCAGAAGCTGCTTTCTACATGGTGGGCACTATAGAGGACGTGATCGCCAAGTCACAGGCTCTAGCCAAATCAGTCTAG
>DPOGS211996-PA
MSVEQEILVTGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYNEMKVGGVIKEDYKTSKVALVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKTGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDSTSRVMDPNIIGAEHYGVARGVQKILQDYKSLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFQVAEVFTGHIGKMVKLEETIKGFKRILMGELDHIPEAAFYMVGTIEDVIAKSQALAKSV-