Monarch geneset OGS2.0

DPOGS211996
TranscriptDPOGS211996-TA1059 bp
ProteinDPOGS211996-PA352 aa
Genomic positionDPSCF300692 + 4498-9772
RNAseq coverage49x (Rank: top 70%)
Annotation
HeliconiusHMEL0025410.090.03% 
BombyxBGIBMGA003901-TA0.096.31% 
DrosophilaATPsyn-beta-PA0.089.14% 
EBI UniRef50UniRef50_Q058251e-18089.14%ATP synthase subunit beta, mitochondrial n=3850 Tax=root RepID=ATPB_DROME
NCBI RefSeqXP_002432207.10.089.74%ATP synthase subunit beta, putative [Pediculus humanus corporis]
NCBI nr blastpgi|2420235740.089.74%ATP synthase subunit beta, putative [Pediculus humanus corporis]
NCBI nr blastxgi|2420235741e-17589.74%ATP synthase subunit beta, putative [Pediculus humanus corporis]
Group
Gene OntologyGO:00452611.8e-268proton-transporting ATP synthase complex, catalytic core F(1)
GO:00159861.8e-268ATP synthesis coupled proton transport
GO:00085531.8e-268hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:00469331.8e-268hydrogen ion transporting ATP synthase activity, rotational mechanism
GO:00055241.4e-63ATP binding
GO:00159912.6e-51ATP hydrolysis coupled proton transport
GO:00331782.6e-51proton-transporting two-sector ATPase complex, catalytic domain
GO:00168202.6e-51hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:00001663.1e-06nucleotide binding
GO:00171113.1e-06nucleoside-triphosphatase activity
KEGG pathwayphu:Phum_PHUM5768100.0 
 K02133 (ATPeF1B, ATP5B)maps-> Huntington's disease
    Oxidative phosphorylation
    Alzheimer's disease
    Parkinson's disease
InterPro domain[1-352] IPR0057221.8e-268ATPase, F1 complex, beta subunit
[10-230] IPR0001941.4e-63ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
[233-350] IPR0240341.2e-55ATPase, F1 complex beta subunit/V1 complex, C-terminal
[233-350] IPR0007932.6e-51ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
[23-293] IPR0035933.1e-06ATPase, AAA+ type, core
Orthology groupMCL10269 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS211996-TA
ATGTCCGTGGAACAGGAGATATTGGTGACGGGCATCAAAGTTGTCGATCTTCTGGCCCCTTACGTAAAAGGTGGCAAAATCGGTCTATTCGGTGGCGCTGGCGTCGGGAAAACGGTTCTGATCATGGAACTCATCAATAACGTAGCCAAGGCCCACGGTGGATTTTCGGTTTTCGCCGGAGTCGGTGAACGGACCCGAGAAGGCAATGATCTCTACAACGAGATGAAAGTCGGCGGTGTCATAAAAGAAGATTACAAAACATCAAAAGTGGCGCTAGTGTACGGCCAGATGAACGAGCCCCCGGGAGCCAGAGCTCGTGTCGCCCTCACTGGGTTGACCCTCGCCGAGCACTTTAGGGACAAGGAAGGACAGGATGTGCTGCTGTTCGTTGATAACATCTTCAGATTCACTCAAGCCGGTTCCGAGGTGTCAGCGTTACTGGGTCGTATACCATCCGCCGTGGGCTACCAGCCGACTCTCGCTACTGATATGGGCACCATGCAGGAGAGAATCACGACGACTAAGACAGGATCTATAACCAGTGTCCAGGCGGTGTATGTGCCAGCTGATGACCTAACCGATCCAGCGCCAGCCACCACCTTCGCTCATCTCGACGCCACCACGGTACTATCTCGTGCTATCGCCGAGCTTGGTGTCTATCCAGCCGTGGATCCACTAGACTCCACATCCAGAGTAATGGACCCGAATATCATTGGAGCGGAGCATTACGGAGTGGCGAGAGGAGTGCAGAAGATATTACAAGACTACAAGTCGTTACAAGACATCATTGCCATCTTGGGCATGGATGAACTGTCTGAGGATGATAAGCTGACTGTTGCGAGGGCGAGGAAGATCCAGCGGTTTCTATCGCAGCCCTTCCAGGTGGCAGAAGTGTTTACAGGTCACATCGGTAAGATGGTCAAATTGGAAGAGACCATTAAAGGATTCAAAAGGATTCTGATGGGTGAGTTGGACCACATCCCAGAAGCTGCTTTCTACATGGTGGGCACTATAGAGGACGTGATCGCCAAGTCACAGGCTCTAGCCAAATCAGTCTAG

Protein sequence:

>DPOGS211996-PA
MSVEQEILVTGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYNEMKVGGVIKEDYKTSKVALVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKTGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVDPLDSTSRVMDPNIIGAEHYGVARGVQKILQDYKSLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFQVAEVFTGHIGKMVKLEETIKGFKRILMGELDHIPEAAFYMVGTIEDVIAKSQALAKSV-