DPOGS211998 | ||
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Transcript | DPOGS211998-TA | 603 bp |
Protein | DPOGS211998-PA | 200 aa |
Genomic position | DPSCF301151 - 105-2444 | |
RNAseq coverage | 2469x (Rank: top 5%) |
Annotation | ||||
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Heliconius | HMEL007125 | 3e-73 | 92.26% |   |
Bombyx | BGIBMGA000419-TA | 4e-94 | 86.50% |   |
Drosophila | CG9914-PA | 8e-77 | 68.72% |   |
EBI UniRef50 | UniRef50_D3TM79 | 7e-66 | 62.00% | 3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Neoptera RepID=D3TM79_GLOMM |
NCBI RefSeq | XP_001601340.1 | 3e-79 | 71.28% | PREDICTED: similar to 3-hydroxyacyl-coa dehyrogenase [Nasonia vitripennis] |
NCBI nr blastp | gi|156547253 | 5e-78 | 71.28% | PREDICTED: lambda-crystallin homolog [Nasonia vitripennis] |
NCBI nr blastx | gi|157117489 | 8e-75 | 69.50% | 3-hydroxyacyl-coa dehyrogenase [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0006631 | 5.3e-50 | fatty acid metabolic process | |
GO:0003857 | 5.3e-50 | 3-hydroxyacyl-CoA dehydrogenase activity | ||
GO:0055114 | 5.3e-50 | oxidation-reduction process | ||
GO:0016491 | 5.3e-50 | oxidoreductase activity | ||
GO:0005488 | 4e-49 | binding | ||
KEGG pathway | nvi:100116345 | 9e-79 |   | |
  | K13247 (CRYL1) | maps-> | Pentose and glucuronate interconversions | |
InterPro domain | [9-187] IPR006176 | 5.3e-50 | 3-hydroxyacyl-CoA dehydrogenase, NAD binding | |
[4-195] IPR016040 | 4e-49 | NAD(P)-binding domain | ||
Orthology group | MCL13176 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS211998-TA
ATGGCGAGTAAATATAAAACTGAGAAAGTTGGAATTGTTGGGAGTGGTCTAATTGGGAGATCATGGGCCATGCTTTTCGCTTCTGTGGGTTATCAGGTTACGATATTTGACATCATTCCAAAGCAAGTTACTGATGCGCTGGAGGATATTAAAATACAGCTGAAGACTTTGCAGAAAGATGGACTTCTGCGTGGATCTCTTAACGCTGATGAACAGTACAGTTGCATTAAAGGATCCACTGATCTAGCTGTCGCTGTGAAAGACGCGATTTTCGTTCAAGAATGTGTGCCAGAAAGTTTAGACTTAAAGAAGAAAGTTTTCCAAAACTTAGACAAGGTTGTAGATGATAAAACTATTTTATCAAGCTCAACCAGTACGACATTACCATCTTTATTCTCAGAAGGGTTGAAGCATAAGTCGCAGGTAATAGTATCGCATCCAGTGAACCCACCATACTATGTGCCTTTGGTGGAAATAGTCCCAGCGCCATGGACGAAGCCTGAAGTTGCCAAGAAAACAAGAGAAATTATGATCGAAATAGGACAAGAGCCGGTGTCACTTACGAGAGAAATTGACGGATTTGTGCTCAACCGCATACAGTAA
>DPOGS211998-PA
MASKYKTEKVGIVGSGLIGRSWAMLFASVGYQVTIFDIIPKQVTDALEDIKIQLKTLQKDGLLRGSLNADEQYSCIKGSTDLAVAVKDAIFVQECVPESLDLKKKVFQNLDKVVDDKTILSSSTSTTLPSLFSEGLKHKSQVIVSHPVNPPYYVPLVEIVPAPWTKPEVAKKTREIMIEIGQEPVSLTREIDGFVLNRIQ-