| DPOGS212015 | ||
|---|---|---|
| Transcript | DPOGS212015-TA | 351 bp |
| Protein | DPOGS212015-PA | 116 aa |
| Genomic position | DPSCF300054 - 902464-907387 | |
| RNAseq coverage | 806x (Rank: top 16%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL004676 | 6e-31 | 66.00% | |
| Bombyx | BGIBMGA010170-TA | 4e-56 | 98.17% | |
| Drosophila | n-syb-PE | 8e-43 | 77.36% | |
| EBI UniRef50 | UniRef50_B4PDQ3 | 1e-40 | 82.83% | GE20941 n=11 Tax=Coelomata RepID=B4PDQ3_DROYA |
| NCBI RefSeq | NP_001156248.1 | 6e-45 | 85.58% | hypothetical protein LOC100166654 [Acyrthosiphon pisum] |
| NCBI nr blastp | gi|242247607 | 2e-43 | 85.58% | n-synaptobrevin [Acyrthosiphon pisum] |
| NCBI nr blastx | gi|345495211 | 2e-44 | 77.42% | PREDICTED: synaptobrevin-like isoform 1 [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016021 | 3.9e-32 | integral to membrane | |
| GO:0016192 | 3.9e-32 | vesicle-mediated transport | ||
| KEGG pathway | api:100166654 | 2e-44 | ||
| K13504 (VAMP2) | maps-> | Salivary secretion | ||
| SNARE interactions in vesicular transport | ||||
| Vasopressin-regulated water reabsorption | ||||
| InterPro domain | [14-115] IPR016444 | 1.4e-39 | Synaptobrevin, metazoa/fungi | |
| [28-110] IPR001388 | 3.9e-32 | Synaptobrevin | ||
| Orthology group | MCL15583 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212015-TA
ATGGCTGCGGAAGGTGGTCTCGCTCCAAATGGCGATGATATGCCAGTTGGGGGTCCTAAGACACCCCAGCAGATAGCAGCACAACGCCGCTTGCAACAAACGCAGGCTCAGGTTGATGAGGTTGTTGACATAATGAAAACGAACGTTGAAAAGGTGTTGGAGAGAGATCAAAAGCTCTCGGAGCTTGACGACAGAGCAGATGCCTTGCAGCAAGGTGCTTCGCAGTTTGAACAACAGGCTGGAAAACTGAAAAGCAAATTCTGGCTGCAGAACCTAAAGATGATGATAATTGCAGCTGTCATTGGAATCATTATTTTGGCTCTTATCATTGGTGAGTACTCGATTTTTTAG
>DPOGS212015-PA
MAAEGGLAPNGDDMPVGGPKTPQQIAAQRRLQQTQAQVDEVVDIMKTNVEKVLERDQKLSELDDRADALQQGASQFEQQAGKLKSKFWLQNLKMMIIAAVIGIIILALIIGEYSIF-