DPOGS212019 | ||
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Transcript | DPOGS212019-TA | 492 bp |
Protein | DPOGS212019-PA | 163 aa |
Genomic position | DPSCF300054 - 852593-853624 | |
RNAseq coverage | 1010x (Rank: top 13%) |
Annotation | ||||
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Heliconius | HMEL013597 | 3e-80 | 83.64% |   |
Bombyx | BGIBMGA010172-TA | 1e-57 | 80.00% |   |
Drosophila | Taf12-PA | 3e-47 | 54.72% |   |
EBI UniRef50 | UniRef50_Q1HPY2 | 3e-76 | 83.73% | Transcription initiation factor TFIID subunit 12 n=3 Tax=Endopterygota RepID=Q1HPY2_BOMMO |
NCBI RefSeq | NP_001040422.1 | 7e-77 | 83.73% | transcription initiation factor TFIID subunit 12 [Bombyx mori] |
NCBI nr blastp | gi|114051678 | 1e-75 | 83.73% | transcription initiation factor TFIID subunit 12 [Bombyx mori] |
NCBI nr blastx | gi|114051678 | 2e-72 | 83.73% | transcription initiation factor TFIID subunit 12 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0003677 | 5.1e-33 | DNA binding | |
GO:0005669 | 3.2e-29 | transcription factor TFIID complex | ||
GO:0006352 | 3.2e-29 | transcription initiation, DNA-dependent | ||
KEGG pathway | ame:410305 | 2e-46 |   | |
  | K03126 (TFIID10, TAF12) | maps-> | Basal transcription factors | |
InterPro domain | [55-129] IPR009072 | 5.1e-33 | Histone-fold | |
[60-127] IPR003228 | 3.2e-29 | Transcription initiation factor TFIID | ||
Orthology group | MCL13932 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212019-TA
ATGCCAACGATGGGATCTCTGAACCAGGGGATCCAGTATGCTAATAATCCGATCCAAAGCCCTCAGCTTCAAACGTCACTGCAAGGCTCGCCCTCGCAACATAGCCCTATGGGAATGCAATCACAAACAGCACCTAAACTAAACCAAGGAGGTGGCGATCAAACGTCACAACTTCTCAGTCGTCCAAGACTTCAAGAGCTGGTCCGGGAAATCGACCCTACTATGCAGCTTGATGAAGAAGTAGAGGAAATATTACTGCAATTAGCCGATGACTTCATTGACACATCACTATCTTCATCTTGCGCTCTAGCTAAACACAGACATTCATCGAATGTGGAACTTAAAGATGTTCAACTACATTTAGAACGACAATGGAATATGTGGATTCCAGGTTTTGGAAATGATGAACTAAGGCCTTATAAACGAGCAGCAGTTACGGAAGCACACAAACAGAGAATGGCTCTCATTAGAAAGACTATTAAAAAATATTAA
>DPOGS212019-PA
MPTMGSLNQGIQYANNPIQSPQLQTSLQGSPSQHSPMGMQSQTAPKLNQGGGDQTSQLLSRPRLQELVREIDPTMQLDEEVEEILLQLADDFIDTSLSSSCALAKHRHSSNVELKDVQLHLERQWNMWIPGFGNDELRPYKRAAVTEAHKQRMALIRKTIKKY-