| DPOGS212111 | ||
|---|---|---|
| Transcript | DPOGS212111-TA | 633 bp |
| Protein | DPOGS212111-PA | 210 aa |
| Genomic position | DPSCF300038 - 391275-396127 | |
| RNAseq coverage | 2885x (Rank: top 4%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012523 | 6e-76 | 93.42% | |
| Bombyx | BGIBMGA006742-TA | 9e-73 | 93.06% | |
| Drosophila | TpnC41C-PA | 7e-62 | 75.82% | |
| EBI UniRef50 | UniRef50_A7UU42 | 1e-66 | 82.89% | AGAP006179-PA n=8 Tax=Neoptera RepID=A7UU42_ANOGA |
| NCBI RefSeq | NP_001091793.1 | 2e-74 | 92.76% | troponin C type IIIa-like protein [Bombyx mori] |
| NCBI nr blastp | gi|148298843 | 4e-73 | 92.76% | troponin C type IIIa-like protein [Bombyx mori] |
| NCBI nr blastx | gi|148298843 | 3e-73 | 92.76% | troponin C type IIIa-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005509 | 5.8e-23 | calcium ion binding | |
| KEGG pathway | ecb:100071150 | 2e-30 | ||
| K02183 (CALM) | maps-> | Salivary secretion | ||
| Olfactory transduction | ||||
| Alzheimer's disease | ||||
| Phototransduction - fly | ||||
| Glioma | ||||
| Phosphatidylinositol signaling system | ||||
| Insulin signaling pathway | ||||
| Neurotrophin signaling pathway | ||||
| Melanogenesis | ||||
| Oocyte meiosis | ||||
| Phototransduction | ||||
| GnRH signaling pathway | ||||
| Plant-pathogen interaction | ||||
| Long-term potentiation | ||||
| Gastric acid secretion | ||||
| Vascular smooth muscle contraction | ||||
| Calcium signaling pathway | ||||
| InterPro domain | [138-207] IPR011992 | 5.8e-23 | EF-hand-like domain | |
| [180-206] IPR018248 | 8.7e-08 | EF-hand | ||
| [180-208] IPR002048 | 3.6e-06 | Calcium-binding EF-hand | ||
| Orthology group | MCL17370 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212111-TA
ATGAAAATTATATACAGTGGACCGGTGGTCTGCATCAATTTAGCCAGTCGGACAACGGATCAACACTTAAAAGCGTTCGTTTGGCCAAAAAGAGATTACTCGATAGTGTTGGGATGGACCAGAAACGGAGCCAATCTGGGTGAAATAGTCGTGCGGCTGCGATTAGTCTGTCAAGAAGATCTACCGAAGGAACAAATTAATATCCTCAAGAAAGCCTTCGAGGCTTTTGATCATGAGAAGAAAGGATGCATTGGCACCGTGATGGTGGGGACTATTCTTACAATGTTAGGACATCAGATCACGGACGATTATCTCCAAGAAATTATAAAAGAAGTTGATGTTGACGGATCTGGAGAACTTGAATTTGAAGAGTTCGTAACATTGGCTTCAAGGTTTATGGTTGAAGAAGATGCTGAGGCAATGCAACAAGAACTCAAAGAAGCATTCCGTTTATATGATAAAGAAGGTAACGGTTACATTACGACACAAGTATTGAGAGAGATTCTGAGGGAACTGGACGACAAAATCAGTGCTGAGGAATTGGATATGATGATCGAGGAAATTGACTCCGACGGTTCTGGTACCGTGGACTTTGATGAATTCATGGAAGTGATGACTGGTGGCGACGACTAG
>DPOGS212111-PA
MKIIYSGPVVCINLASRTTDQHLKAFVWPKRDYSIVLGWTRNGANLGEIVVRLRLVCQEDLPKEQINILKKAFEAFDHEKKGCIGTVMVGTILTMLGHQITDDYLQEIIKEVDVDGSGELEFEEFVTLASRFMVEEDAEAMQQELKEAFRLYDKEGNGYITTQVLREILRELDDKISAEELDMMIEEIDSDGSGTVDFDEFMEVMTGGDD-