Monarch geneset OGS2.0

DPOGS212118
TranscriptDPOGS212118-TA1389 bp
ProteinDPOGS212118-PA462 aa
Genomic positionDPSCF300038 - 203892-205963
RNAseq coverage730x (Rank: top 18%)
Annotation
HeliconiusHMEL0077280.091.81% 
BombyxBGIBMGA006749-TA0.087.39% 
DrosophilaEfTuM-PA0.079.49% 
EBI UniRef50UniRef50_P858347e-15564.68%Elongation factor Tu, mitochondrial n=25 Tax=Coelomata RepID=EFTU_RAT
NCBI RefSeqNP_001040119.10.088.11%elongation factor Tu [Bombyx mori]
NCBI nr blastpgi|3392839000.090.54%elongation factor [Spodoptera exigua]
NCBI nr blastxgi|3392839000.090.54%elongation factor [Spodoptera exigua]
Group
Gene OntologyGO:00056229.5e-215intracellular
GO:00037469.5e-215translation elongation factor activity
GO:00064149.5e-215translational elongation
GO:00055259.5e-215GTP binding
GO:00039243.9e-60GTPase activity
KEGG pathwayaga:AgaP_AGAP0069960.0 
 K02358 (EF-TU, tufA)maps-> Plant-pathogen interaction
InterPro domain[52-450] IPR0045419.5e-215Translation elongation factor EFTu/EF1A, bacterial/organelle
[56-248] IPR0007953.9e-60Protein synthesis factor, GTP-binding
[347-438] IPR0090011e-28Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
[252-346] IPR0090002.9e-25Translation elongation/initiation factor/Ribosomal, beta-barrel
[343-436] IPR0041602.1e-22Translation elongation factor EFTu/EF1A, C-terminal
[60-194] IPR0052259.5e-12Small GTP-binding protein domain
[272-338] IPR0041611e-10Translation elongation factor EFTu/EF1A, domain 2
Orthology groupMCL11455 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212118-TA
ATGGCGACTATATCATTTGCTAAAAGTTGGGTTAACCCCGCTCTTAAATTAGTTTTAAAACAGAGCCAATGTTCTCATTTACGATGCACAAGTGTACCATCGCTAACACCTCTAAGTATTGTACTTCGTAGAAACTATGCCGAGAAGGTGGTGTTTGAACGCACCAAGCCTCATTGTAATGTAGGCACTATTGGGCATGTTGACCACGGGAAAACAACACTCACCGCAGCCATCACCAAAGTATTAGCTGACCTTAATTTAGCTCAAAAGAAAGGGTACTCAGATATTGACAATGCTCCTGAAGAGAAGGCTCGAGGTATTACCATCAATGTAGCTCATGTTGAATATCAAACGGAGACACGGCACTATGGACACACTGATTGTCCAGGTCACGCTGATTACATTAAGAACATGATAACTGGGACAGCACAGATGGATGGAGCAATTCTGGTTGTAGCTGCTACAGACGGAGTCATGCCACAAACAAGGGAACATTTGTTATTGGCAAAGCAAATTGGCATACAACATATAGTTGTTTTCATTAATAAAGTCGATGCTGCTGATCAGGAAATGGTTGAATTAGTAGAAATGGAGATTCGTGAACTCATGACTGAAATGGGATATGACGGAGACAATGTTCCAGTCATCAAAGGCTCTGCTCTATGTGCATTGGAAGGCAAAAAACCTGAAATTGGTTCAGAAGCCATTAGTAAACTATTGCAAGAAGTCGATTCATTTATCCCAACCCCTGTAAGGGAATTAGACAAGCCATTCCTGTTGCCTGTTGAATCAGTACACTCAATTCCTGGTAGAGGAACTGTTGTCACTGGCCGTTTATACAGGGGTAATAAAGGAACTGAATGTGAAATAGTTGGTCATGGAAAAGTAATGAAAACAACTGTTACTGGTGTAGAGATGTTCCACAAAACATTAGAAGAGGCACAGGCTGGTGACCAACTCGGTGCTTTAGTCAGATCAATCAAAAGGGAACAGATCAAACGTGGTATGGTTATGGCTAAGCCTGGAACTGTAAAAGCACATGACAGCTTGGAAGCAGCCGTATACATATTGAGTAAAGATGAAGGCGGTCGTTCAAAACCCTTTACATCATTTATCCAGTTGCAAATGTTTTCTATGACTTGGGATTGTGCTGCACAAGTTACAGTCCCTGATAAGGAGATGGTTATGCCTGGAGAAGATGCCACATTACAACTCAAATTGTTGAAACCTATGGTCTGTGAACCGGGACAAAGATTCACTTTGCGTCTTGGAGATTTAACTCTAGGGACTGGTGTTATTACTAAAGTGAACAAAAATCTCTCCGAAGAAGACAGACTGAAACTTATGGAAGGAAAGAAAGCAAGAGAGAAGGCTGCTGCAAAGAAGTGA

Protein sequence:

>DPOGS212118-PA
MATISFAKSWVNPALKLVLKQSQCSHLRCTSVPSLTPLSIVLRRNYAEKVVFERTKPHCNVGTIGHVDHGKTTLTAAITKVLADLNLAQKKGYSDIDNAPEEKARGITINVAHVEYQTETRHYGHTDCPGHADYIKNMITGTAQMDGAILVVAATDGVMPQTREHLLLAKQIGIQHIVVFINKVDAADQEMVELVEMEIRELMTEMGYDGDNVPVIKGSALCALEGKKPEIGSEAISKLLQEVDSFIPTPVRELDKPFLLPVESVHSIPGRGTVVTGRLYRGNKGTECEIVGHGKVMKTTVTGVEMFHKTLEEAQAGDQLGALVRSIKREQIKRGMVMAKPGTVKAHDSLEAAVYILSKDEGGRSKPFTSFIQLQMFSMTWDCAAQVTVPDKEMVMPGEDATLQLKLLKPMVCEPGQRFTLRLGDLTLGTGVITKVNKNLSEEDRLKLMEGKKAREKAAAKK-