Monarch geneset OGS2.0

DPOGS212180
TranscriptDPOGS212180-TA2331 bp
ProteinDPOGS212180-PA776 aa
Genomic positionDPSCF300038 + 1163683-1174007
RNAseq coverage69x (Rank: top 66%)
Annotation
HeliconiusHMEL0125713e-2847.59% 
BombyxBGIBMGA006716-TA3e-7333.52% 
DrosophilaalphaPS5-PA8e-2323.58% 
EBI UniRef50UniRef50_Q1G0S74e-10834.87%Hemocyte-specific integrin alpha subunit 1 n=1 Tax=Manduca sexta RepID=Q1G0S7_MANSE
NCBI RefSeqXP_001663561.19e-2725.81%integrin alpha-ps [Aedes aegypti]
NCBI nr blastpgi|989625021e-10734.87%hemocyte-specific integrin alpha subunit 1 [Manduca sexta]
NCBI nr blastxgi|989625023e-10834.73%hemocyte-specific integrin alpha subunit 1 [Manduca sexta]
Group
Gene OntologyGO:00083053.4e-14integrin complex
GO:00071553.4e-14cell adhesion
KEGG pathwaycfa:4884299e-31 
 K06483 (ITGA4)maps-> Leishmaniasis
    Regulation of actin cytoskeleton
    Arrhythmogenic right ventricular cardiomyopathy (ARVC)
    Hematopoietic cell lineage
    ECM-receptor interaction
    Dilated cardiomyopathy
    Leukocyte transendothelial migration
    Cell adhesion molecules (CAMs)
    Focal adhesion
    Hypertrophic cardiomyopathy (HCM)
    Intestinal immune network for IgA production
InterPro domain[309-364] IPR0135191.1e-14Integrin alpha beta-propellor
[196-208] IPR0004133.4e-14Integrin alpha chain
[317-348] IPR0135171e-06FG-GAP
Orthology groupMCL18521 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212180-TA
ATGAGTGTGATTGGTGAAATTATTCTGATGCTTTTGAAAGTTCTACCAATTCTATCAGTTTATCATGAACCATCTATGATAGTCATCTCTCTACCAAACGGTTCACAACCAGATGCCATGTTGGGATTTAGTATGGCCTATTACAATAAGCACCTATTCATAAGCGCTCCAAAATATGGTAATGGTAGAATCTTTGATTATGATGTTTTAAAAAATAAAAGTGTTAAAGAAATCTCTCTTCCTAATGTAGATGACGGGAGAAGCTATTGGTTTGGAGCGGTTTTAAAAGCCGGCTCTGAATTTTTAGTGACTTGCGCCCCGAGACTATGGTATCAAACTTATAACCATAAGACGAGAGGCTTGTGCTATTCAGTTACAAACAATACTCTGCGGGAATTTAAGGATATACCTTCAGACCAAATTAATTATTATTCAAATTCCGGCCTTGACACAGCAGGCTGGAGCATAGAAGTTGACGCTGAAGATTTTGTACTAATTGGAAGTCCTGCAGTGAGCTTAAGAGGAATCGTGAAATTTTACCACAACCAGAGGGCGCTGCCGAGAGTTTTTCTGAATTTGATTAAAAGTTATAATTTTGGTTACGCCATCGCAAGCGGAAACTTTCTATCAGATAACGAAATATGTTATGCAATTAGTACAACTTTTGGTGATTTTGGAGAAGGGATGGTCTTTATCTTAAATAAGGACAACAAAGAGTTGCTCAGACTATCTGGCACTGAAGTAGGCGGATTGTATGGAGCTGCTTTGTGTAAAGTTAACTTGTATGGATCAAGATCCAGTCTTCTTGTTGGATCTCCTACATTTTCAGAAAGATCTGACCGTTATGACAACGGCGCTGTGTATTTGTATGTGAATGAAGGGGCTAAGGATTTGACATTAAAAAGAATTATAAAAGGAAACAAAAACGGTGGATACTTCGGTTTCGCTATCGCTAGTTTAGGAGACTTGGATGGCGACGGACGCGAGGAAGTCGCGATAGGAGCACCATACGAAGACGACTTGAAGGGTGCTGTGTACATATATACTGGAGCTAGTCTCTTGTCTGGGAATACGTGGTTACAGAAGATTCAACCGGAGGAATATCAAACCATTGGACATAGTCTGGTTCCTTTAGATAATTGTTTTAACAGCGGATGTAACGAATTAGCAGTTGGAGCACCATTTAGCGATAAAGCCTTTATATTGAAGTGCAACAGTCATATCACAGTAAATTTAGAAGCATTCTTTCCAAACATACAGATGAGAACGAACAGAACATTTTTTGTATTCGCTGTTTGTACTAATATAGAGTATCCAAAAAAACATAGCATAAATTCAAGTATCTCCATTAAGGTGGATATAAATCACCCGGATGCATCATTGGAAAATGAAAATGGTACATTTGCGTTTCCCATTGGTTCTGACGTATTATATTGCAAGAACGTCACCGTCTTAACGCCGATCGAAGGTAATTATGATGAACTGATAGCGTACAAAATATCAGCCTCATTAAGCAATGTAGCGAACAATGAATACTCAAGCTCGCGGGCTGTGCTCAGCGAGAGGAGCAAGGTTGAAATACAAGGACAAGTGTCTGCTGCTGACTGTGAGGGCCGAGAAAGATGTGTTCCTATATTAACCGCTACATTACAATCAAATATTACTGAACCATTTGTCGTTGGTTCAGACAACGCGAGCTTTTCGTTGTCCTTGCTCAATTCGGGCGAGTCTGCTTACTCCGCGTGTGCCCACGTGCTCGTGTCCGGCGCCCACGTGTTCCGACACCCGAGTACTTGCACACGCCCTGATCAGACAGAACAAGTCATTTGTAAGCCGGCGAGACCTATAACCACTAATGATGTTTGGAGAATCGGAGAAATACAAATTGATACCGATACATTGACGAGCGAAGACGAAAACATTACCATAACATACGTTGTATACAGTCATTGCAACAATCACGACGACAGAAAAAAATATGAAAAAATAATCCGTCTCGGTTACGACACAGAAGGAATCGTTGTAAATGGTATATCCAATCCTAGTGATTTAGTAAATTTTACTTCAGAGGACGCCGCAAAGAAACAGCAGCTGGAGCATGTCTATTTGATCACAAATAACGGCTTAACTCATTGGGTTGGTGTTAAATGTGAAGTCTTACTTGAGAAGAGTCCCTACTTCAATTACAGTGTGTCTGTAGATGACATCATACGCGCTGGAAACGCTTACGTCGTGACTAGGCTTGCCGTTTTACTGAAACAAGAACGATTAGTCCAGAGGATCGGGGAAATAGAGACGATTGCGATTCAGATTCAAATTAGGAACAAATAG

Protein sequence:

>DPOGS212180-PA
MSVIGEIILMLLKVLPILSVYHEPSMIVISLPNGSQPDAMLGFSMAYYNKHLFISAPKYGNGRIFDYDVLKNKSVKEISLPNVDDGRSYWFGAVLKAGSEFLVTCAPRLWYQTYNHKTRGLCYSVTNNTLREFKDIPSDQINYYSNSGLDTAGWSIEVDAEDFVLIGSPAVSLRGIVKFYHNQRALPRVFLNLIKSYNFGYAIASGNFLSDNEICYAISTTFGDFGEGMVFILNKDNKELLRLSGTEVGGLYGAALCKVNLYGSRSSLLVGSPTFSERSDRYDNGAVYLYVNEGAKDLTLKRIIKGNKNGGYFGFAIASLGDLDGDGREEVAIGAPYEDDLKGAVYIYTGASLLSGNTWLQKIQPEEYQTIGHSLVPLDNCFNSGCNELAVGAPFSDKAFILKCNSHITVNLEAFFPNIQMRTNRTFFVFAVCTNIEYPKKHSINSSISIKVDINHPDASLENENGTFAFPIGSDVLYCKNVTVLTPIEGNYDELIAYKISASLSNVANNEYSSSRAVLSERSKVEIQGQVSAADCEGRERCVPILTATLQSNITEPFVVGSDNASFSLSLLNSGESAYSACAHVLVSGAHVFRHPSTCTRPDQTEQVICKPARPITTNDVWRIGEIQIDTDTLTSEDENITITYVVYSHCNNHDDRKKYEKIIRLGYDTEGIVVNGISNPSDLVNFTSEDAAKKQQLEHVYLITNNGLTHWVGVKCEVLLEKSPYFNYSVSVDDIIRAGNAYVVTRLAVLLKQERLVQRIGEIETIAIQIQIRNK-