| DPOGS212210 | ||
|---|---|---|
| Transcript | DPOGS212210-TA | 1050 bp |
| Protein | DPOGS212210-PA | 349 aa |
| Genomic position | DPSCF300323 + 127929-128978 | |
| RNAseq coverage | 45x (Rank: top 71%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013284 | 3e-55 | 34.02% | |
| Bombyx | BGIBMGA001156-TA | 1e-109 | 56.17% | |
| Drosophila | CG10749-PA | 1e-51 | 35.14% | |
| EBI UniRef50 | UniRef50_Q9VU29 | 2e-49 | 35.14% | Malate dehydrogenase n=10 Tax=Drosophila RepID=Q9VU29_DROME |
| NCBI RefSeq | XP_002066060.1 | 1e-51 | 35.40% | GK22135 [Drosophila willistoni] |
| NCBI nr blastp | gi|195436206 | 3e-50 | 35.40% | GK22135 [Drosophila willistoni] |
| NCBI nr blastx | gi|195327277 | 6e-48 | 35.46% | GM25384 [Drosophila sechellia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0055114 | 1.4e-64 | oxidation-reduction process | |
| GO:0006108 | 1.4e-64 | malate metabolic process | ||
| GO:0030060 | 1.4e-64 | L-malate dehydrogenase activity | ||
| GO:0016616 | 5.1e-36 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | ||
| GO:0003824 | 5.1e-36 | catalytic activity | ||
| GO:0005975 | 5.1e-36 | carbohydrate metabolic process | ||
| GO:0005488 | 5.5e-21 | binding | ||
| GO:0016491 | 5.2e-17 | oxidoreductase activity | ||
| GO:0044262 | 1.1e-11 | cellular carbohydrate metabolic process | ||
| KEGG pathway | dwi:Dwil_GK22135 | 4e-51 | ||
| K00026 (MDH2) | maps-> | Citrate cycle (TCA cycle) | ||
| Pyruvate metabolism | ||||
| Carbon fixation in photosynthetic organisms | ||||
| Glyoxylate and dicarboxylate metabolism | ||||
| InterPro domain | [3-348] IPR010097 | 1.4e-64 | Malate dehydrogenase, type 1 | |
| [174-338] IPR015955 | 5.1e-36 | Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | ||
| [174-337] IPR022383 | 2.6e-23 | Lactate/malate dehydrogenase, C-terminal | ||
| [28-173] IPR016040 | 5.5e-21 | NAD(P)-binding domain | ||
| [29-158] IPR001236 | 5.2e-17 | Lactate/malate dehydrogenase, N-terminal | ||
| [27-341] IPR001557 | 1.1e-11 | L-lactate/malate dehydrogenase | ||
| Orthology group | MCL44299 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212210-TA
ATGAATGTATTTAGTAGAAGTTTACAAAGAACACAATTTAAATCTCTTTGTTCTGTAAAAAATTATGTGCAGCGAAGAAATGTACAAATATCGATAGTCGGTGCCGCTAGTGACATTGGAAAGAACGTGGCATTGCTGTTGAAACGGAATCCTTATATTACGAGGCTGCACTTATACGATGACAATAATATAGTAAAAGGTATTGGCCTGGAATTGGAACAGATTCCCGGAGGACCCAAAGTAGCTTCATTTTCGGGGGATCCCTTTTTGTCGGCAGCTATAAGATACTCCAATCTGGTACTGCTTGTTTCGAGAACTCCTCGTAAACTCGGATTTTCCCGTGAACAGATGCTAGCCACGAATGCTATACCCGTATATAAATTGTGCAAAGTTTTGTCATACCAAAACCCTGATGCCTTTTTTGCCATTTCAACTAATCCTATAAATTCAATAATACCGTTTGCAAACTTATTATTAAAAAACTGCAACGCTCATAATCCGTTTAAACTCTTCGGTATAACCCACATCGACACGACGAGAGCCAGGGCCTTCATTTCAAACACTTTGAACGTTAATCCGAGACATCTCTATGTACCGGTGATCGGAGGGCACTCTGACGAAACGATAGTTCCCCTATTTTCAAATTTGTGTCCTAGCCATTATTGCGTCGGTCACTGTGAAGCTGACACATTGACACGTCTGATTAAGAAATCTGGCACAGAAGTGTTAAACCGAAAGCACGGCAGTGATTCATCGACGCTGGCTATGGCCTGGTCGATCAACGAATTCGTCCAAAATCTCATTGAAGCTCTGTACGGGAACTGTGTAATCGTGAACAGTTATACAGCGAATCCTCATTTTGGAACAAAATTTTTTTCAGGTCCGACTAAGGTTGGACCCGAAGGCGTCATAGAAACATGCAATAAGACCTTTCACATGAGTGATTATGAAAGCAAACTCCTGGAGCGCGCTGTTCCCATCATAAACAGGGACGTGGCTGAGGGTGAAGCGCATGTCAGCGTCCTCGAAAGTGCCAGGAGTTGTTACTAG
>DPOGS212210-PA
MNVFSRSLQRTQFKSLCSVKNYVQRRNVQISIVGAASDIGKNVALLLKRNPYITRLHLYDDNNIVKGIGLELEQIPGGPKVASFSGDPFLSAAIRYSNLVLLVSRTPRKLGFSREQMLATNAIPVYKLCKVLSYQNPDAFFAISTNPINSIIPFANLLLKNCNAHNPFKLFGITHIDTTRARAFISNTLNVNPRHLYVPVIGGHSDETIVPLFSNLCPSHYCVGHCEADTLTRLIKKSGTEVLNRKHGSDSSTLAMAWSINEFVQNLIEALYGNCVIVNSYTANPHFGTKFFSGPTKVGPEGVIETCNKTFHMSDYESKLLERAVPIINRDVAEGEAHVSVLESARSCY-