Monarch geneset OGS2.0

DPOGS212214
TranscriptDPOGS212214-TA327 bp
ProteinDPOGS212214-PA108 aa
Genomic positionDPSCF301566 + 219-763
RNAseq coverage102x (Rank: top 61%)
Annotation
HeliconiusHMEL0057602e-3961.34% 
BombyxBGIBMGA009181-TA1e-1365.96% 
DrosophilaDNA-ligI-PA4e-3354.72% 
EBI UniRef50UniRef50_F6Y1Y01e-3969.44%DNA ligase (Fragment) n=3 Tax=Ciona intestinalis RepID=F6Y1Y0_CIOIN
NCBI RefSeqXP_001606591.12e-3966.67%PREDICTED: similar to ENSANGP00000010547 [Nasonia vitripennis]
NCBI nr blastpgi|2700048952e-3866.67%hypothetical protein TcasGA2_TC003800 [Tribolium castaneum]
NCBI nr blastxgi|1984271517e-3769.44%PREDICTED: similar to ligase I [Ciona intestinalis]
Group
Gene OntologyGO:00036772.1e-15DNA binding
GO:00062812.1e-15DNA repair
GO:00039102.1e-15DNA ligase (ATP) activity
GO:00063102.1e-15DNA recombination
GO:00055247.4e-12ATP binding
KEGG pathwaycin:1001815193e-39 
 K10747 (LIG1)maps-> Base excision repair
    DNA replication
    Mismatch repair
    Nucleotide excision repair
InterPro domain[3-51] IPR0123082.1e-15DNA ligase, ATP-dependent, N-terminal
[49-107] IPR0123107.4e-12DNA ligase, ATP-dependent, central
Orthology groupMCL34928 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212214-TA
AGCCTCATAGACGAATACGCGCTCATCATCAAGACGACGTACTGCGAGTGTCCCAACTATGACCTGATAGTTCCAGTACTGCTGCAGCACGGCGTGAGGTCTCTGCCAGAACACTGCCGCCTAACTCCAGGTCTGCCACTCAAACCCATGCTGGCTCACCCCACTAAAGGAGTACATGAAGTCTTCAACAGGTTCGACGGCTCGGTTTTCACATGCGAGTATAAATACGACGGCGAGCGCGCTCAGATACATGTGCCGGGGTGCGGGAGACCAGACCTGGAGCGCGCCGCCATATACAGCAGGAACCAGGAGGACAACACGTCGTGA

Protein sequence:

>DPOGS212214-PA
SLIDEYALIIKTTYCECPNYDLIVPVLLQHGVRSLPEHCRLTPGLPLKPMLAHPTKGVHEVFNRFDGSVFTCEYKYDGERAQIHVPGCGRPDLERAAIYSRNQEDNTS-