DPOGS212271 | ||
---|---|---|
Transcript | DPOGS212271-TA | 465 bp |
Protein | DPOGS212271-PA | 154 aa |
Genomic position | DPSCF300077 - 43919-44576 | |
RNAseq coverage | 7662x (Rank: top 2%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL006655 | 2e-80 | 90.73% |   |
Bombyx | BGIBMGA011584-TA | 2e-65 | 98.33% |   |
Drosophila | CG9836-PA | 7e-65 | 83.57% |   |
EBI UniRef50 | UniRef50_Q9H1K1 | 9e-60 | 85.04% | Iron-sulfur cluster assembly enzyme ISCU, mitochondrial n=1340 Tax=root RepID=ISCU_HUMAN |
NCBI RefSeq | XP_975631.1 | 7e-65 | 90.15% | PREDICTED: similar to CG9836 CG9836-PA [Tribolium castaneum] |
NCBI nr blastp | gi|307205390 | 5e-64 | 90.91% | Iron-sulfur cluster assembly enzyme ISCU, mitochondrial [Harpegnathos saltator] |
NCBI nr blastx | gi|307205390 | 3e-62 | 90.91% | Iron-sulfur cluster assembly enzyme ISCU, mitochondrial [Harpegnathos saltator] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016226 | 2.5e-69 | iron-sulfur cluster assembly | |
GO:0005506 | 2.5e-69 | iron ion binding | ||
GO:0051536 | 2.5e-69 | iron-sulfur cluster binding | ||
KEGG pathway |   | |||
InterPro domain | [28-151] IPR011339 | 2.5e-69 | ISC system FeS cluster assembly, IscU scaffold | |
[28-151] IPR002871 | 4.5e-55 | NIF system FeS cluster assembly, NifU, N-terminal | ||
Orthology group | MCL14044 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS212271-TA
ATGGCTTTCATAATACCAAATTTGTGTAAATGTTTATGCTTGAGGAATCGAGCCGGCCTTAACCTTGTACAAACTGCGTCATATCATGCCAATGTGATTGACCACTACGAAAATCCTCGTAATGTTGGGTCTTTAGACAAAAAGGATGCTAATGTTGGCACAGGGTTGGTTGGGGCACCAGCTTGCGGTGATGTTATGAAGTTGCAAATTAAAGTTGACGAAAACGGGAAAATAATAGACGCCAAGTTTAAGACCTTTGGTTGCGGCTCTGCTATTGCTTCCAGCTCTCTTGCTACAGAGTGGGTCAAGGGCAAAACAGTTGATGAAGCATTGAAACTGAAGAACACTGACATTGCTAAGGAATTGTCCTTGCCTCCTGTGAAACTGCATTGTTCTATGCTAGCTGAAGATGCTATCAAAGCTGCACTTTCAGACTACAGGATCAAGCAGCAAGGAAAGAAGTAG
>DPOGS212271-PA
MAFIIPNLCKCLCLRNRAGLNLVQTASYHANVIDHYENPRNVGSLDKKDANVGTGLVGAPACGDVMKLQIKVDENGKIIDAKFKTFGCGSAIASSSLATEWVKGKTVDEALKLKNTDIAKELSLPPVKLHCSMLAEDAIKAALSDYRIKQQGKK-