| DPOGS212323 | ||
|---|---|---|
| Transcript | DPOGS212323-TA | 675 bp |
| Protein | DPOGS212323-PA | 224 aa |
| Genomic position | DPSCF300019 - 940352-941303 | |
| RNAseq coverage | 111x (Rank: top 59%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013370 | 1e-79 | 83.59% | |
| Bombyx | BGIBMGA012004-TA | 4e-56 | 61.72% | |
| Drosophila | dm-PA | 1e-20 | 59.09% | |
| EBI UniRef50 | UniRef50_F8WT28 | 7e-54 | 61.72% | C-myc n=2 Tax=Obtectomera RepID=F8WT28_BOMMO |
| NCBI RefSeq | XP_001853504.1 | 2e-23 | 55.21% | conserved hypothetical protein [Culex quinquefasciatus] |
| NCBI nr blastp | gi|379698932 | 2e-53 | 61.72% | c-myc [Bombyx mori] |
| NCBI nr blastx | gi|379698932 | 4e-62 | 66.50% | c-myc [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 9.4e-11 | nucleus | |
| GO:0006355 | 9.4e-11 | regulation of transcription, DNA-dependent | ||
| GO:0003700 | 5.8e-05 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | rno:24577 | 1e-08 | ||
| K04377 (MYC) | maps-> | Colorectal cancer | ||
| Thyroid cancer | ||||
| MAPK signaling pathway | ||||
| Small cell lung cancer | ||||
| Pathways in cancer | ||||
| Wnt signaling pathway | ||||
| Acute myeloid leukemia | ||||
| Endometrial cancer | ||||
| Bladder cancer | ||||
| TGF-beta signaling pathway | ||||
| ErbB signaling pathway | ||||
| Cell cycle | ||||
| Jak-STAT signaling pathway | ||||
| Chronic myeloid leukemia | ||||
| InterPro domain | [127-207] IPR011598 | 9.4e-11 | Helix-loop-helix DNA-binding | |
| [138-189] IPR001092 | 4.2e-09 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | MCL26771 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212323-TA
ATGTCGATAGACGCTGCGGTAGTACGACGACGGGGTCGACGCCCTCCCCCCTTCCCCCTCATACCCCCACCCTCTCACCCACCGCCCCCCGACTACTGCAATCGCATCCCACCACGGGTACACGAGGTCCAGGAGGAAATTGATGTGGTATCGTTGGGGACATCCCAGCAGCCGCTGGCCTCAACGTCGCCCGTGAGAGTCGACTCGCTGCCCCGAGCACCTTCCGTTCAGGAGCGTCACCACATACAGCGCACTGTGGAGAACGTTATAACGAGACCCCCAGCCAGGAAACGGCTGGTGCCACCTACCAGCATACCCACGGCCTCCGTGCCACGGCGGAGGAGAGGTCCCGGCAGACGGGGGCGCTCCAACACAGACACGGACTCGGAGGCCGAGTCTCCGGAGATCGAACGCAGATCCATACACAATGATATGGAACGGTTGAGACGCATCGGCCTAAAGAACCTCTTCGACGAGCTCAAGAAGCAAATACCCGCAACCAGAGATAAGGAGCGAGCGCCGAAGGTCGTGATACTGCGGGAGGCGGCGGCCCTGTGCCGCAAGCTGCGAGAGGAGGACCTCGAGCGGGAGTACCTTAAAAAACAACAGAATAAATTGATGACCAAACTGAAAAAAATGCGTACGATGCTCGCGGCACGATACCGGCCGTATTGA
>DPOGS212323-PA
MSIDAAVVRRRGRRPPPFPLIPPPSHPPPPDYCNRIPPRVHEVQEEIDVVSLGTSQQPLASTSPVRVDSLPRAPSVQERHHIQRTVENVITRPPARKRLVPPTSIPTASVPRRRRGPGRRGRSNTDTDSEAESPEIERRSIHNDMERLRRIGLKNLFDELKKQIPATRDKERAPKVVILREAAALCRKLREEDLEREYLKKQQNKLMTKLKKMRTMLAARYRPY-