| DPOGS212340 | ||
|---|---|---|
| Transcript | DPOGS212340-TA | 231 bp |
| Protein | DPOGS212340-PA | 76 aa |
| Genomic position | DPSCF300019 - 332956-333447 | |
| RNAseq coverage | 3714x (Rank: top 3%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005666 | 1e-38 | 92.11% | |
| Bombyx | BGIBMGA004650-TA | 4e-37 | 88.16% | |
| Drosophila | CG14235-PA | 3e-14 | 42.47% | |
| EBI UniRef50 | UniRef50_A8P4J4 | 9e-14 | 47.22% | Putative uncharacterized protein n=2 Tax=Dikarya RepID=A8P4J4_COPC7 |
| NCBI RefSeq | XP_316509.4 | 2e-15 | 49.32% | AGAP006471-PB [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|385303150 | 2e-14 | 49.35% | cytochrome c oxidase subunit vib [Dekkera bruxellensis AWRI1499] |
| NCBI nr blastx | gi|385303150 | 1e-16 | 49.35% | cytochrome c oxidase subunit vib [Dekkera bruxellensis AWRI1499] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0004129 | 1.3e-23 | cytochrome-c oxidase activity | |
| GO:0005739 | 1.3e-23 | mitochondrion | ||
| KEGG pathway | ppa:PAS_chr4_0422 | 3e-15 | ||
| K02267 (COX6B) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Cardiac muscle contraction | ||||
| Parkinson's disease | ||||
| InterPro domain | [4-75] IPR003213 | 1.3e-23 | Cytochrome c oxidase, subunit VIb | |
| Orthology group | MCL10782 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212340-TA
ATGTGTGACCAGGAGTTTAGAACATTACGTATCGACCCTCGGTATCCATTTCAGAATCAGACGAAGGCGTGCTACGACAACTACTGCGACTATTATAAATGCACCCGTCTTTTGGGCGATGTAGACGATTGCAAGATATTCAAAAGATACTTCCAGACTATCTGCCCCAACTTTTGGATCGAACACTGGGATGAACTCCGGGAGAAAGGGGCTTTCCCTGGACCCATTTAA
>DPOGS212340-PA
MCDQEFRTLRIDPRYPFQNQTKACYDNYCDYYKCTRLLGDVDDCKIFKRYFQTICPNFWIEHWDELREKGAFPGPI-