DPOGS212382 | ||
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Transcript | DPOGS212382-TA | 948 bp |
Protein | DPOGS212382-PA | 315 aa |
Genomic position | DPSCF300019 + 559390-564450 | |
RNAseq coverage | 25x (Rank: top 77%) |
Annotation | ||||
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Heliconius | HMEL005630 | 2e-136 | 81.23% |   |
Bombyx | BGIBMGA009688-TA | 4e-08 | 28.89% |   |
Drosophila | eg-PB | 6e-38 | 35.81% |   |
EBI UniRef50 | UniRef50_E0VVW8 | 2e-53 | 42.51% | Putative uncharacterized protein n=2 Tax=Neoptera RepID=E0VVW8_PEDHC |
NCBI RefSeq | XP_002430262.1 | 4e-54 | 42.51% | conserved hypothetical protein [Pediculus humanus corporis] |
NCBI nr blastp | gi|242019629 | 7e-53 | 42.51% | conserved hypothetical protein [Pediculus humanus corporis] |
NCBI nr blastx | gi|242019629 | 3e-54 | 43.18% | conserved hypothetical protein [Pediculus humanus corporis] |
Group | ||||
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Gene Ontology | GO:0005634 | 1.7e-13 | nucleus | |
GO:0006355 | 1.7e-13 | regulation of transcription, DNA-dependent | ||
GO:0043565 | 1.7e-13 | sequence-specific DNA binding | ||
GO:0008270 | 1.7e-13 | zinc ion binding | ||
GO:0003700 | 1.7e-13 | sequence-specific DNA binding transcription factor activity | ||
GO:0003707 | 4.2e-07 | steroid hormone receptor activity | ||
GO:0043401 | 4.2e-07 | steroid hormone mediated signaling pathway | ||
KEGG pathway |   | |||
InterPro domain | [7-55] IPR001628 | 1.7e-13 | Zinc finger, nuclear hormone receptor-type | |
[9-51] IPR013088 | 4.7e-11 | Zinc finger, NHR/GATA-type | ||
[52-107] IPR008946 | 4.2e-07 | Nuclear hormone receptor, ligand-binding | ||
Orthology group | MCL22686 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212382-TA
ATGAGCTGTTCAGAAGACGAAATGTCTTTCTTCGGGCGAACGTACAACAACCTCTCCTCGATTTCTGAATGCAAGAACAATGGTGAATGTGTCATCAATAAGAAAAACAGGACGGCTTGCAAGGCATGCAGGTTGCGGAAATGTTTGCTAGTCGGCATGTCCAAATCAGGATCACGTTACGGGCGAAGATCGAACTGGTTTAAGATCCACTGCCTTTTACAAGAGCAGCAGCAACAACACATGCAACAATTACAGACAAGTAAATCACAAACCACATTAAATACTTCCATCAGCCCATCTTTTTTGCCAACAAATCTTTTGCCGGCAGCCGCTCTTGCGGAATATTATAAGAGTACAGAAAAGAATATTTTCACCGACGAAGTGACGCGACAGAGCGTTTCGCCTTCCGATTCTGGTGCTTCTTCGGCTGACCCAGAGGATGACAATAGTTCCAGGAGTACCAGCGGCTTGAGTATTTTCAGACCCGCCTCCTCGCCCAGCAGTGAAAAAGACACTCGGATACAGGCAATCAGAAATCAAAATAAAGATGTGAGAAGAAAAAAGCCATCAACATTGCCACCTTCACCATTTGGTGCCATGGGAGCTGCGTCTGGTTTTTCGTTTTCACGGAGCGCCCCCTATCTCCCAACACCAATGGCAAATATGAGATCAGTGCCATCAGGAATAGCTTGGCAAAATCGTAGTGGCGGGGATTTGTTACTCCAATCTCCGGCGATTGCTGGCGTTGCCATCGAACAAGACCAACCTATAGATCTGTCTATTAAATCTACAGCAGTTATATTTAGAAATTCAAAAACCGAAGTGAGTGATTCGGAACCCGAGTTGAGTATCGATCTGAATGACGATAACGGTAAAGACATAATGAAGAATCCCCTCGATTTGAGTCTTGTATCAAAACGAGCCGAGGAAGTTCCGATGACTGGCTAG
>DPOGS212382-PA
MSCSEDEMSFFGRTYNNLSSISECKNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQQQHMQQLQTSKSQTTLNTSISPSFLPTNLLPAAALAEYYKSTEKNIFTDEVTRQSVSPSDSGASSADPEDDNSSRSTSGLSIFRPASSPSSEKDTRIQAIRNQNKDVRRKKPSTLPPSPFGAMGAASGFSFSRSAPYLPTPMANMRSVPSGIAWQNRSGGDLLLQSPAIAGVAIEQDQPIDLSIKSTAVIFRNSKTEVSDSEPELSIDLNDDNGKDIMKNPLDLSLVSKRAEEVPMTG-