Monarch geneset OGS2.0

DPOGS212398
TranscriptDPOGS212398-TA2250 bp
ProteinDPOGS212398-PA749 aa
Genomic positionDPSCF300019 + 1092699-1112397
RNAseq coverage650x (Rank: top 20%)
Annotation
HeliconiusHMEL0216986e-12758.31% 
BombyxBGIBMGA012081-TA1e-16567.67% 
DrosophilaSnr1-PA2e-8680.56% 
EBI UniRef50UniRef50_Q240903e-8480.56%GH08712p n=35 Tax=Eumetazoa RepID=Q24090_DROME
NCBI RefSeqXP_001601881.13e-8777.29%PREDICTED: similar to ENSANGP00000012094 [Nasonia vitripennis]
NCBI nr blastpgi|1565495295e-8677.29%PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [Nasonia vitripennis]
NCBI nr blastxgi|1565495291e-8277.29%PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 [Nasonia vitripennis]
Group
Gene OntologyGO:00002288.2e-54nuclear chromosome
GO:00063388.2e-54chromatin remodeling
GO:00050975.6e-41Rab GTPase activator activity
GO:00056225.6e-41intracellular
GO:00323135.6e-41regulation of Rab GTPase activity
KEGG pathway 
InterPro domain[21-170] IPR0069398.2e-54SNF5/SMARCB1/INI1
[363-636] IPR0001955.6e-41Rab-GAP/TBC domain
Orthology groupMCL15463 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212398-TA
ATGGAGGTTAGGACGTTCCCGCTCTGCTTCGATGACACCGACATGACCGCCATGTTGGAGAACGCTTCTCAGAAGCAAGTGCTCGTACCCATCAGATTGGACATGGAAATCGAAGGCCAGAAGCTCAGGGATACATTCACATGGAACAAAAATGAGTCTATTATAACACCGGAGCAGTTTGCTGAAGTCCTGTGCGACGATTTGGAACTGAACACCAGTACGTTCATCCCGGCCATAGCCTCGTCCATCAGACAGCAGATCGAGGCTTTCCCCAGTGAACCACCTCCCATACTCGAGGAGTTGGACCAGAGAGTCATCATCAAACTCAATATACACGTCGGGAACACGTCTCTGGTCGATCAGGTGGAGTGGGATATGGCTGAGAAGGAGAACAATCCGGAACAGTTCGCCATGAAGCTGTGCGCCGAGCTCGGCCTGGGCGGGGAGTTCGTGACGGGAATCGCTTACAGTGTCAGGGGACAACTTAGCTGGCATCAGAGGACCTACGCCTTCAGCGAGGCCCCGTTACCTGTCGTTGAGGTTTTGACACAAGTGTCACAGATTGCTGAACTAATGTCTCAGCAACCGTACATTAAAGCTGTGTACACAAGTGACATCAAGGACACATCATTGGATTGGATTACAGTAGCAGTAGTTTTTCGAATTCGTCTGATGGTTTTAATGAAAGGCGTTTTCCCTTGGAAGAGCAGTTCATCGAAGAACCATGACTCGTCGCCGACGTCCTGGAGATTGTTCGGCAGCAAGTCCAACACTAACCTGGCGAAGAGTCTGACAGCCGAGGTTCAGAAGTCATTGACTCCATCGTCCTCCGCGGCCACCACACCACACCACCACAAACGGCAGGGCAGCTCTGCCAGCGAGAAGCAGTTTGATGACCTCGTCGCCAGCTCAATAGCCCTAATACAACATGACAGACCATCAAATCTGCCGGCAAAATGTACGGAGGAAGCCCTGCGTCACAAAGCGGAACACGCTCGAATGGTTGAAGCGGCGAGACGAAGAGTGGAGCGAGAGGCTGCTGCAAGACATGCCAAGATGCAGGAGTCACTGAGGATGGAAGAGAGACTAGCGAGACACGCGCGGGAGTGGACGCAGAACATACTCCCTGACTGGCAGAACATGAAAAATGCTAAACGAACTCAGGAACTTTGGTGGAGCGGGCTACCACCGTCTGTAAGAGGCCGGGTGTGGCAACTGGCCATAGAGAACAAGCTTAACATAACAGAGCAAATGTACCAAGATTATGTTGCCAAAGCAAAGCAGAAGTTACACGAGGCGCAGTTGAGAAGGAAGCGATTAAAACTCAACAACTCCTGTCACTGTCGAGAAGACGACGCTAAAGATACGGAAGAAAAGATAACAAAAGATGCCAACAAGGAAGACAACGCGAAGAAGACGGACAAAACAAGAACTGACGATAGGAAGGATGAGAAAACTGAGAAACTGAGGTTGGGGATGCCGAGGAACTACAGCGAGCAGAACCTGAAGACCTTACACGTGGAGGCACCGAACAAGTGCTGCTCGAAATCCAACCCTAATCTGTTGGAGTATAGTGACGAATGTTCCATGGAGCTGATACAGCTGGACATCTCGAGGACTTTCCCACACCTGTGTATTTTCCAGCCGGGAGGGCCGTACTTCGACGTCCTACATGAATTGCTAGCGGCTTACGTGTGCTACAGACCGGATATAGGATATGTACAGGGTATGTCGTTCATAGCGGCCGTGTTGATACTGAACATGGAAGCGTCCCAGGCGTTCATGTGTTTCTCCAACCTCCTGGAATGGCCGGTGCTGAGGGCCGCCTTCACTAGAGACGGCGCCACGATGCAGCGTCTATGGCGAGCGTACACGGCCGTCCTGTCTAGCGAGCTGCCCCGTCTCGCGTCTGTGGTGGCCCCTGAGCTGTATCTGGTGGACTGGATCTACTCAGTGTTTGCCAAACCGATGCCCCTAGACGCCGCCTGTCGAGTTTGGGACGTCCTGCTCAGAGACGGCGATCACTTCCTCTTCCACGTGGCCCTCGGGGTGCTACATTTATATCAGAACGAATTGAAGGATATGGATTTCATATCAGCCGCTCAGTTTCTTACCAAATTGCCGGACGACCTGGACCCCGAGGCCCTCTTCAGGAGTATCTCCTCTACATCGTTGACAGCAGACGGCCTGACCTTCGAAGAGCTCGTCACCAACTGCCAAATAGACGAAGAAGACAGCGTCAGATTATGA

Protein sequence:

>DPOGS212398-PA
MEVRTFPLCFDDTDMTAMLENASQKQVLVPIRLDMEIEGQKLRDTFTWNKNESIITPEQFAEVLCDDLELNTSTFIPAIASSIRQQIEAFPSEPPPILEELDQRVIIKLNIHVGNTSLVDQVEWDMAEKENNPEQFAMKLCAELGLGGEFVTGIAYSVRGQLSWHQRTYAFSEAPLPVVEVLTQVSQIAELMSQQPYIKAVYTSDIKDTSLDWITVAVVFRIRLMVLMKGVFPWKSSSSKNHDSSPTSWRLFGSKSNTNLAKSLTAEVQKSLTPSSSAATTPHHHKRQGSSASEKQFDDLVASSIALIQHDRPSNLPAKCTEEALRHKAEHARMVEAARRRVEREAAARHAKMQESLRMEERLARHAREWTQNILPDWQNMKNAKRTQELWWSGLPPSVRGRVWQLAIENKLNITEQMYQDYVAKAKQKLHEAQLRRKRLKLNNSCHCREDDAKDTEEKITKDANKEDNAKKTDKTRTDDRKDEKTEKLRLGMPRNYSEQNLKTLHVEAPNKCCSKSNPNLLEYSDECSMELIQLDISRTFPHLCIFQPGGPYFDVLHELLAAYVCYRPDIGYVQGMSFIAAVLILNMEASQAFMCFSNLLEWPVLRAAFTRDGATMQRLWRAYTAVLSSELPRLASVVAPELYLVDWIYSVFAKPMPLDAACRVWDVLLRDGDHFLFHVALGVLHLYQNELKDMDFISAAQFLTKLPDDLDPEALFRSISSTSLTADGLTFEELVTNCQIDEEDSVRL-