DPOGS212427 | ||
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Transcript | DPOGS212427-TA | 735 bp |
Protein | DPOGS212427-PA | 244 aa |
Genomic position | DPSCF300258 + 42023-43941 | |
RNAseq coverage | 267x (Rank: top 40%) |
Annotation | ||||
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Heliconius | HMEL009617 | 1e-101 | 70.49% |   |
Bombyx | BGIBMGA002886-TA | 4e-90 | 68.03% |   |
Drosophila | sni-PA | 1e-70 | 51.82% |   |
EBI UniRef50 | UniRef50_E2AHG8 | 1e-72 | 53.82% | C-factor n=17 Tax=Neoptera RepID=E2AHG8_CAMFO |
NCBI RefSeq | XP_968272.2 | 8e-78 | 53.85% | PREDICTED: similar to short-chain dehydrogenase [Tribolium castaneum] |
NCBI nr blastp | gi|260907980 | 3e-98 | 71.72% | short-chain dehydrogenase [Heliothis virescens] |
NCBI nr blastx | gi|260907980 | 2e-94 | 71.72% | short-chain dehydrogenase [Heliothis virescens] |
Group | ||||
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Gene Ontology | GO:0005488 | 6.6e-39 | binding | |
GO:0008152 | 2.4e-16 | metabolic process | ||
GO:0016491 | 2.4e-16 | oxidoreductase activity | ||
KEGG pathway |   | |||
InterPro domain | [2-239] IPR016040 | 6.6e-39 | NAD(P)-binding domain | |
[3-20] IPR002347 | 7.9e-18 | Glucose/ribitol dehydrogenase | ||
[2-181] IPR002198 | 2.4e-16 | Short-chain dehydrogenase/reductase SDR | ||
Orthology group | MCL14707 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212427-TA
ATGAAATCGGTACTAATAACAGGAGCGAACCGCGGACTAGGACTCGGGATGGTGAAATTTCTCACTAAAAACACTAAAGTCGAAAATATCTTCGCAACATGTCGCAACGTTTCCGAGGAACTTAAAAATATATCGGAAACAAATAAAAATGTTCATATTCTTCATTTAGAGGCGGCAGATGTGGCAAGCTTCGATAATTTATTTCCCCAAATTTCTAAAGTCACAGGAGACCAAGGTTTAAACTTACTCATAAACAACGCCGGCACGTCCACAAAATTCACAAAACTGAATTTAGTAAAACCAGAGCAGTTGTTGAGTAATCTGACAATTAATACTATTGCTCCGATTATACTTACCAAGAGTCTTCTTCCTCTTTTAAAACAAGCAGCTCAAAATAACAGCGACAAACCAGTCGGGGTGGGCCGCGCTGCGGTTATCAATATGAGCTCTGTGCTAGGTTCCATTGCACAGAACGACGTCGGCGGATTTTATGCTTACCGATGCTCGAAGGCCGCATTGAACGCAGCTACGAAATCAATGAGCATCGACCTCAAGAAGGATCACATACTCGTCGCTTCGATGCACCCGGGCTGGGTGAGAACGGACATGGGCGGGAAAAAGGCACCGCTAGATGTCGACACTAGTGTCGCTGGCATGTTCAGTACTATCCAAAAACTCACAGAGGCGGACAGCGGGAAATTTCTACAGTACGACGGCTCAGAGTTGCCATGGTAA
>DPOGS212427-PA
MKSVLITGANRGLGLGMVKFLTKNTKVENIFATCRNVSEELKNISETNKNVHILHLEAADVASFDNLFPQISKVTGDQGLNLLINNAGTSTKFTKLNLVKPEQLLSNLTINTIAPIILTKSLLPLLKQAAQNNSDKPVGVGRAAVINMSSVLGSIAQNDVGGFYAYRCSKAALNAATKSMSIDLKKDHILVASMHPGWVRTDMGGKKAPLDVDTSVAGMFSTIQKLTEADSGKFLQYDGSELPW-