Monarch geneset OGS2.0

DPOGS212447
TranscriptDPOGS212447-TA528 bp
ProteinDPOGS212447-PA175 aa
Genomic positionDPSCF300258 + 285807-286918
RNAseq coverage10515x (Rank: top 1%)
Annotation
HeliconiusHMEL0175634e-3350.72% 
BombyxBGIBMGA002907-TA3e-5768.39% 
DrosophilaCG9027-PD2e-4448.60% 
EBI UniRef50UniRef50_Q6QVQ54e-4350.87%Superoxide dismutase [Cu-Zn] n=9 Tax=Nematocera RepID=Q6QVQ5_ANOGA
NCBI RefSeqNP_001037358.21e-5764.20%time interval measuring enzyme-esterase A4 [Bombyx mori]
NCBI nr blastpgi|736712251e-5664.20%diapause bioclock protein [Bombyx mandarina]
NCBI nr blastxgi|736712257e-5964.20%diapause bioclock protein [Bombyx mandarina]
Group
Gene OntologyGO:00047842.5e-59superoxide dismutase activity
GO:00551142.5e-59oxidation-reduction process
GO:00068019e-53superoxide metabolic process
GO:00468729e-53metal ion binding
KEGG pathwaydpo:Dpse_GA214882e-43 
 K04565 (E1.15.1.1C, sodC, SOD1)maps-> Huntington's disease
    Peroxisome
    Amyotrophic lateral sclerosis (ALS)
    Prion diseases
InterPro domain[27-174] IPR0241342.5e-59Superoxide dismutase (Cu/Zn) / chaperones
[35-174] IPR0014249e-53Superoxide dismutase, copper/zinc binding domain
Orthology groupMCL15798 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212447-TA
ATGCTTTACCATTTGCTATTTTTGTCGGTGGCAGGCGTTATTGTATCTGCGCAGAATGTTGGGAACGCACCGTTGAGAGCGATTGTTAAACTTTCAAGTCCCGACGGTCGTGATGTCCATGGAAATATTACCCTCACTCAGCTGGAGGGCAGGGTCCATGTTGAGGGTTCCATCTACGGTTTGCCCCCAGGACAGTACGGCTTCCACGTACATGAGACTGGAGACATAACTCGAGGCTGTATCTCCACTGGATCGCATTTCAACCCTGAGAAGAAAGACCACGGCCATCCCAGCGATGAAGTCCGTCACGTTGGAGACTTGGGGAACGTTGAATTTGATATGAACAGATTCAGTAACATCAATTTCGAAGACAAATTGATCGCTTTGTACGGACCCCACAACGTTCTTGGAAGGGCAATTGTCTTACACGAAAAGGCCGATGACTTCGGCAGATCAGACCATCCTGACTCCAGGAAGACGGGCAACGCTGGCGGACGAGTCGCGTGTGGAGTCATCGGCATCCTGTAA

Protein sequence:

>DPOGS212447-PA
MLYHLLFLSVAGVIVSAQNVGNAPLRAIVKLSSPDGRDVHGNITLTQLEGRVHVEGSIYGLPPGQYGFHVHETGDITRGCISTGSHFNPEKKDHGHPSDEVRHVGDLGNVEFDMNRFSNINFEDKLIALYGPHNVLGRAIVLHEKADDFGRSDHPDSRKTGNAGGRVACGVIGIL-