DPOGS212449 | ||
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Transcript | DPOGS212449-TA | 660 bp |
Protein | DPOGS212449-PA | 219 aa |
Genomic position | DPSCF300258 + 292826-294163 | |
RNAseq coverage | 774x (Rank: top 17%) |
Annotation | ||||
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Heliconius | HMEL010955 | 7e-28 | 33.85% |   |
Bombyx | BGIBMGA002908-TA | 2e-23 | 31.07% |   |
Drosophila | Tsp47F-PB | 1e-14 | 27.75% |   |
EBI UniRef50 | UniRef50_A1Z8K7 | 2e-12 | 27.75% | Tetraspanin 47F, isoform B n=11 Tax=Neoptera RepID=A1Z8K7_DROME |
NCBI RefSeq | XP_972145.1 | 4e-16 | 27.54% | PREDICTED: similar to Tetraspanin 47F CG9033-PB [Tribolium castaneum] |
NCBI nr blastp | gi|91091190 | 7e-15 | 27.54% | PREDICTED: similar to Tetraspanin 47F CG9033-PB [Tribolium castaneum] |
NCBI nr blastx | gi|91091192 | 1e-14 | 28.04% | PREDICTED: similar to GA21493-PA [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0016021 | 5.6e-25 | integral to membrane | |
KEGG pathway | aga:AgaP_AGAP008527 | 4e-08 |   | |
  | K06497 (CD63, MLA1) | maps-> | Lysosome | |
InterPro domain | [17-199] IPR018499 | 5.6e-25 | Tetraspanin | |
[84-176] IPR008952 | 2.5e-09 | Tetraspanin, EC2 domain | ||
[14-40] IPR000301 | 3.2e-07 | Tetraspanin, subgroup | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212449-TA
ATGCGTGATCACGCTCACCGCGAACAGCCGTCCTCACTGTCCCGGGGAGTGCTGTCTTTTATCCTTACCCTGGGATTTGGGTTGATCGTCACAGCTGTGCTAGGCTGCATTGGCTCATTAAGAGAAAATGTCAAGATTCTATACGTGCACTCCTGTTTCCTCATGTTCCTGTTATCGGTAGAGGTGATGGTCGGAGTGGGGAGTGCCGTCATAAACGCCTGGGTCGGAGGAGGCAGTGAACTCAGGCTGCAGTTCTATAAAAACATCACAGTCGATGATGAGGGACCTAACCAGCAGGCGTTCTGGGACAAATTACAGTCTGAAAACCAATGCTGCGGCGTGGACGGCCCCCAAGACTATGCCATCTTACAACGAGATATCCCCGCGTCTTGTTGCGCACGCGCTCACCCCCTACGAGAAGGCGGTGCGAGAAGACATCTACACTCTACCTGCATCACCGAAAGATCATACTACGTGAGAGGCTGCGAGGAAGTGCTGCGACAAAAGAAGGCATTCAAGGGAAACATTTTTATTACAACTGGAATTATTTTCACTCTATTGGAGATCGTGTGCATCATTCTATCTCTGTGGATGGCTCGCGTTGTCAGACAGGAACGTCGAAAACTTCAACAGAACTTACAAGCTCATTTCGAGACATAA
>DPOGS212449-PA
MRDHAHREQPSSLSRGVLSFILTLGFGLIVTAVLGCIGSLRENVKILYVHSCFLMFLLSVEVMVGVGSAVINAWVGGGSELRLQFYKNITVDDEGPNQQAFWDKLQSENQCCGVDGPQDYAILQRDIPASCCARAHPLREGGARRHLHSTCITERSYYVRGCEEVLRQKKAFKGNIFITTGIIFTLLEIVCIILSLWMARVVRQERRKLQQNLQAHFET-