DPOGS212517 | ||
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Transcript | DPOGS212517-TA | 411 bp |
Protein | DPOGS212517-PA | 136 aa |
Genomic position | DPSCF300222 + 474324-474734 | |
RNAseq coverage | 0x (Rank: top 98%) |
Annotation | ||||
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Heliconius | HMEL009332 | 5e-75 | 100.00% |   |
Bombyx | BGIBMGA009648-TA | 5e-75 | 100.00% |   |
Drosophila | His3:CG33866-PA | 8e-75 | 99.26% |   |
EBI UniRef50 | UniRef50_G3H2T7 | 5e-73 | 99.26% | Histone H3 n=7 Tax=Cricetulus griseus RepID=G3H2T7_CRIGR |
NCBI RefSeq | XP_001608238.1 | 2e-73 | 99.26% | PREDICTED: similar to histone protein Hist2h3c1 [Nasonia vitripennis] |
NCBI nr blastp | gi|156382552 | 6e-73 | 99.26% | predicted protein [Nematostella vectensis] |
NCBI nr blastx | gi|354480098 | 5e-69 | 99.26% | PREDICTED: histone H3.2-like [Cricetulus griseus] |
Group | ||||
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Gene Ontology | GO:0003677 | 8.3e-144 | DNA binding | |
GO:0006334 | 8.3e-144 | nucleosome assembly | ||
GO:0000786 | 8.3e-144 | nucleosome | ||
KEGG pathway | nve:NEMVE_v1g229551 | 8e-74 |   | |
  | K11253 (H3) | maps-> | Systemic lupus erythematosus | |
InterPro domain | [1-136] IPR000164 | 8.3e-144 | Histone H3 | |
[2-136] IPR009072 | 5.1e-82 | Histone-fold | ||
[58-131] IPR007125 | 3.9e-32 | Histone core | ||
Orthology group | MCL10038 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212517-TA
ATGGCTCGCACCAAGCAAACCGCTAGGAAGTCTACCGGGGGCAAAGCACCACGAAAACAACTGGCGACCAAAGCTGCCAGGAAGAGCGCTCCCGCCACCGGCGGAGTGAAGAAGCCACACAGATACAGGCCGGGGACGGTAGCCCTGAGAGAGATAAGGAGATACCAGAAGAGCACCGAGCTGCTCATCAGGAAGCTGCCCTTCCAGCGACTGGTGCGAGAGATAGCACAGGACTTCAAGACGGACCTGAGGTTCCAGAGCTCAGCTGTGATGGCGCTGCAGGAGGCCAGCGAGGCGTACCTCGTGGGACTGTTCGAGGACACCAACCTGTGTGCCATCCACGCCAAGAGAGTCACCATCATGCCCAAGGACATCCAGCTAGCCAGGAGAGTGCGCGGAGAGAGAGCTTGA
>DPOGS212517-PA
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRVRGERA-