| DPOGS212589 | ||
|---|---|---|
| Transcript | DPOGS212589-TA | 810 bp |
| Protein | DPOGS212589-PA | 269 aa |
| Genomic position | DPSCF300245 - 358622-360697 | |
| RNAseq coverage | 40x (Rank: top 73%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006029 | 3e-116 | 75.38% | |
| Bombyx | BGIBMGA005192-TA | 2e-89 | 77.32% | |
| Drosophila | Mdh2-PA | 3e-25 | 31.58% | |
| EBI UniRef50 | UniRef50_E9BQH0 | 1e-24 | 32.62% | Malate dehydrogenase, putative n=5 Tax=Leishmania RepID=E9BQH0_LEIDB |
| NCBI RefSeq | XP_002402153.1 | 9e-26 | 30.36% | malate dehydrogenase, putative [Ixodes scapularis] |
| NCBI nr blastp | gi|241243545 | 2e-24 | 30.36% | malate dehydrogenase, putative [Ixodes scapularis] |
| NCBI nr blastx | gi|158301478 | 5e-25 | 34.08% | AGAP001903-PA [Anopheles gambiae str. PEST] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016616 | 1.5e-19 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0005975 | 1.5e-19 | carbohydrate metabolic process | ||
| GO:0003824 | 1.5e-19 | catalytic activity | ||
| GO:0055114 | 1.5e-19 | oxidation-reduction process | ||
| GO:0030060 | 2.8e-19 | L-malate dehydrogenase activity | ||
| GO:0006108 | 2.8e-19 | malate metabolic process | ||
| GO:0005488 | 1.9e-07 | binding | ||
| KEGG pathway | isc:IscW_ISCW003528 | 3e-25 | ||
| K00026 (MDH2) | maps-> | Citrate cycle (TCA cycle) | ||
| Pyruvate metabolism | ||||
| Carbon fixation in photosynthetic organisms | ||||
| Glyoxylate and dicarboxylate metabolism | ||||
| InterPro domain | [72-229] IPR015955 | 1.5e-19 | Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | |
| [11-225] IPR010097 | 2.8e-19 | Malate dehydrogenase, type 1 | ||
| [74-229] IPR022383 | 3.6e-11 | Lactate/malate dehydrogenase, C-terminal | ||
| [8-68] IPR016040 | 1.9e-07 | NAD(P)-binding domain | ||
| Orthology group | MCL25110 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212589-TA
ATGCCGCCTTGTTGCAATATTGAAGACAGAGATCTCTTTTTCGAGAACCTCCAGCATGTGCGAACAGTGACCATAGCCTGCGCTGAATTTTGTCCCCACGCAATAATAGCTATCCAGACTCCCCCTGTTGATTGCAACTTTGCGCTGTGTATACATACTTTGCAACTAGCTCGAGTTTACGATAAGCGCAAGGTTCTTGGTGTAAACGCTATAAACTCTATGAGAGCCAACCAGCTGTTCTGCTCCATAACGGGATCTGACCCATCGACGAGGTCGACTCCCGTTATCTGTGGAACCGGCCGATGTACCAGAGTCCCTGTGTTCTCCGCTGGTAATGCTAGCAATTTTCCACAGACTCAGGTTGACTGTCTTACACGTCTCGTAAGAGAAGCTGACGACATCATCTGTAAAGTGAAGAGTAACAGTGAACAGGGTCATCTTTCTATCGGCTTCGCCACCGCTAGATTTGTTGTCAATATAATGAAAGGACTCTTCGAAAAACCAACGTTTATCGACAGCGCACTAGTAGAACAAGCGCATCCTGAAAAATGTTACAACATGACGATTTGTGCGACGCCCGTGACTGTTGGTAAGAATGGGATCCAGGATTATGCGGTACCCAATTTGAACGAAGCGGAGACAAGACTTCTAGAGGATAGCAAATGTGATTTGGAAGACATGTTGAATCTTGGTCGCTGCCACGCCGTCGGTGATGAATACTTCGTCCATCCAGCAAAAATATGTCCAGGGTGTTATTGTACTCCCTGTAGAGTTTGCGAGCCTTGCATGAGAAAAAAAACACAAACCTAA
>DPOGS212589-PA
MPPCCNIEDRDLFFENLQHVRTVTIACAEFCPHAIIAIQTPPVDCNFALCIHTLQLARVYDKRKVLGVNAINSMRANQLFCSITGSDPSTRSTPVICGTGRCTRVPVFSAGNASNFPQTQVDCLTRLVREADDIICKVKSNSEQGHLSIGFATARFVVNIMKGLFEKPTFIDSALVEQAHPEKCYNMTICATPVTVGKNGIQDYAVPNLNEAETRLLEDSKCDLEDMLNLGRCHAVGDEYFVHPAKICPGCYCTPCRVCEPCMRKKTQT-