DPOGS212600 | ||
---|---|---|
Transcript | DPOGS212600-TA | 618 bp |
Protein | DPOGS212600-PA | 205 aa |
Genomic position | DPSCF300245 - 168136-168823 | |
RNAseq coverage | 98x (Rank: top 61%) |
Annotation | ||||
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Heliconius | HMEL002477 | 6e-73 | 68.06% |   |
Bombyx | BGIBMGA008503-TA | 6e-61 | 57.29% |   |
Drosophila | CG11454-PA | 8e-21 | 49.35% |   |
EBI UniRef50 | UniRef50_UPI000224615C | 1e-27 | 36.36% | UPI000224615C related cluster n=1 Tax=unknown RepID=UPI000224615C |
NCBI RefSeq | XP_307927.4 | 1e-26 | 58.43% | AGAP002256-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|345478874 | 4e-27 | 36.36% | PREDICTED: hypothetical protein LOC100123901 [Nasonia vitripennis] |
NCBI nr blastx | gi|345478874 | 7e-28 | 34.91% | PREDICTED: hypothetical protein LOC100123901 [Nasonia vitripennis] |
Group | ||||
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Gene Ontology | GO:0003676 | 1.2e-17 | nucleic acid binding | |
GO:0000166 | 2.3e-16 | nucleotide binding | ||
KEGG pathway |   | |||
InterPro domain | [8-80] IPR000504 | 1.2e-17 | RNA recognition motif domain | |
[3-79] IPR012677 | 2.3e-16 | Nucleotide-binding, alpha-beta plait | ||
Orthology group | MCL19557 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212600-TA
ATGATCGAAGAGGCCAACAAGACTGTTTGGTGTGGAAATTTATCGGAACAAGTGACCGAAGAACTTCTTTATGAGTTATTTGTTCAAGCAGGTCCAGTAGAGAAGGTTATAATACCAAAAGACAAAGATGGTAGACAAAAGAATTTCGCTTTTATAACATACTGCCATGAAGTATCCGTGCCATATGCCATTAACCTATTCCGTGGCACAGCACTGTTTCATAGAACTCTGCTTCTACAGAATAGAGGTCGAATGGCGTTATTGCCACCACCAATTAGATGCTATGGCCCTGAAGCCAGTCTCGACTTTAATGCTCAATCGAGTGTAACACAACAGTTCACTGATATGACTGATAAGCTTAAGGAGGAAAATCCCCAACCAGCCCACTTACCCACACAGAGACAAGACATGAGCGACAAACTTGTAGTTGCTAGTTTGCAGGGTAATTGGTCTAACCGACACCATCCATATAGGTCTAAAGAGAAATTTCATAATCGCGACGACTACAGACCTAGAGACGGCCATGACAATTATAACAGAGTTAAAACAAGCCATTGGAGAGAAAGACGGGCCCAATCCTGCTCCTCCGCGCTAATTGAATTAGGATCTAACATCTAA
>DPOGS212600-PA
MIEEANKTVWCGNLSEQVTEELLYELFVQAGPVEKVIIPKDKDGRQKNFAFITYCHEVSVPYAINLFRGTALFHRTLLLQNRGRMALLPPPIRCYGPEASLDFNAQSSVTQQFTDMTDKLKEENPQPAHLPTQRQDMSDKLVVASLQGNWSNRHHPYRSKEKFHNRDDYRPRDGHDNYNRVKTSHWRERRAQSCSSALIELGSNI-