Monarch geneset OGS2.0

DPOGS212632
TranscriptDPOGS212632-TA1923 bp
ProteinDPOGS212632-PA640 aa
Genomic positionDPSCF300245 + 416800-424827
RNAseq coverage296x (Rank: top 38%)
Annotation
HeliconiusHMEL0179540.091.74% 
BombyxBGIBMGA005197-TA0.086.86% 
DrosophilaMED17-PA0.059.79% 
EBI UniRef50UniRef50_E0VP270.066.62%CRSP complex subunit, putative n=12 Tax=Coelomata RepID=E0VP27_PEDHC
NCBI RefSeqXP_394516.20.068.60%PREDICTED: similar to Mediator complex subunit 17 CG7957-PA [Apis mellifera]
NCBI nr blastpgi|665073750.068.60%PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Apis mellifera]
NCBI nr blastxgi|665073750.068.50%PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Apis mellifera]
Group
Gene OntologyGO:00063572.6e-85regulation of transcription from RNA polymerase II promoter
GO:00165922.6e-85mediator complex
GO:00011042.6e-85RNA polymerase II transcription cofactor activity
KEGG pathway 
InterPro domain[6-451] IPR0193132.6e-85Mediator complex, subunit Med17
Orthology groupMCL13527 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212632-TA
ATGGCAAATTCTGTAAACATATCGATAGAGGCACCTATAGAGAATCAAATTCAAGAAATTACTTACGATGGCCAAGAAATTTATCAAGCTCCCCTTTCTATGTCTGAAAACCTGGCAAGATTAGCACAGAAAATAGATTTTTCTAAAACTGATGACGAATTCTGCAACATAAAGAAAGAAGGTGACATCGGTTCTGAAGTGAAGTCAGAGGAAGACAAAGAACCTGGCTATCAGTCCAGTTTATGGCCTTGGGATTCTGTCAGGAATAAATTAAGAAATGCCCTCACGGAAGTATCTGTTCTTGCTGATGTGTTGAGCATTGCTAAGGAAAAGAGATATATGGTACTAGATCCAATTCAGGCCGATCCCATAGAAAGCCGTCCGATGGTTCAAGTGTATGGTCGTAAGAAAGCTCTGTCCGCTGCCGGGGCAGTGCTACTCAATGGAGTGGAGAGACTCAGAGCGAGTGAGACCATGAGGATGACTCGCAACATGCCAGACTTCCACATAGACCTGCTGAGACTCAGACAGAACTGGAGACTCAAGAAGGTCTCCAACACTATAGTCGGTGATTTGAGCTACAGAACCGCCGGATCTAAGTTCAGTCAAACCGGTGTTTTTGAGGTGACGAAGGCTCCCGAGGAACAGATCGCGGCCGCTATGAACGCGCCGGGGGCTGCGCCCTCCGCTCTCAGAGTCACCGTGCCGCCTGAACTACAGGGCGTAGCGTTTATATCCGTCCGATGCCAGAAAGAACAAGAGGACGTGGTGACTGCGACCCTCAACTCCTCGGCTCTGAACTGCCCCGGCTCGCTGCCCGGGGACGGCGCGGAACTGCATTGGCAGCAGAAGCTAGAAGCAGCACAGAACGTCCTCTACTGCAAGGAACTGTTCGCCAGGCTCGCGGCAGAAGCGGTTCAACTGGACGCGTCCATACCACACATAGTGGTCGGCAACAGGATCATGCTGACCATCCTGCCCAGCATACAATTGATGATCGGTCTCTGTCACAATAACGGCCAAAATAACAACAACACAGAGGGCACCAAGTCTCAGGGCTCGTACGTGAAGGCTGAGCACGACCACGTATTGGAGCACTCCCTCCACCAGCTGCTGCGAGCCGTCCATCACTCCAACACTCACCATCCCTTCCCTCACCCGGCCACGGGACCTCTCGGACCATCGAAGAGGAGATCGCTGGCTGGTCCTATGGGCGCGGACCGCTATGAACTAATGGAGATGTCCCGCGAACAGTCCCTCCTGGAACAGATCGTGCAGCAAGCGCAGCACTTCTTCATGAGAAGGCGCGGGGAGTACGTACTGGATACCATCGCCAAGGAGGTGAAGGATCCCCTCATAGTGTCACACTGGAACGCTCTAAACAGCCCTACACACTCTTGCGTTAAAATTAATATTATGGCTTATGGGTACGACGCAGTATGTCGAACATCCCTGGTGGTTCATGTCGGAGAAAAAACTTTAAAATGCATCTGTAGGGACGGTAAAGTAAGGAATCTGTCCTACGAGCTGCAAGAATTAAGGGATCTTATTTTCTGTCAGATCTACCAGCACCAGATGACGGGCGTGCAGGCGGTCGGTCGCTGTATGGGCTGGCAACTGCTGGCCAGTTCCTCACACCTGGGCGCTGGACCCGTGGAACCACTAGCTAACGCATCTTCCTGTCTGCTAGCCTCTCCCAATGGTGATAGAATGATAGCTATAAGATGTGAACCATCGGTCGGAATCCAAGTGTTTATAGCACAATCGCCAAAAAAAGACTTCTTTGTTAGTGAATTAGTTCAAGACAAGAAATGGGAAAACCTTGGTGGTGCCTTCAAGGAGGTTAAACTGGAAAAGATGGAAGGCAAGAACTTTCTAAACAAAATGGAGTTACTAATGGCTTGCTTGAGCAGCCCTTCATAG

Protein sequence:

>DPOGS212632-PA
MANSVNISIEAPIENQIQEITYDGQEIYQAPLSMSENLARLAQKIDFSKTDDEFCNIKKEGDIGSEVKSEEDKEPGYQSSLWPWDSVRNKLRNALTEVSVLADVLSIAKEKRYMVLDPIQADPIESRPMVQVYGRKKALSAAGAVLLNGVERLRASETMRMTRNMPDFHIDLLRLRQNWRLKKVSNTIVGDLSYRTAGSKFSQTGVFEVTKAPEEQIAAAMNAPGAAPSALRVTVPPELQGVAFISVRCQKEQEDVVTATLNSSALNCPGSLPGDGAELHWQQKLEAAQNVLYCKELFARLAAEAVQLDASIPHIVVGNRIMLTILPSIQLMIGLCHNNGQNNNNTEGTKSQGSYVKAEHDHVLEHSLHQLLRAVHHSNTHHPFPHPATGPLGPSKRRSLAGPMGADRYELMEMSREQSLLEQIVQQAQHFFMRRRGEYVLDTIAKEVKDPLIVSHWNALNSPTHSCVKINIMAYGYDAVCRTSLVVHVGEKTLKCICRDGKVRNLSYELQELRDLIFCQIYQHQMTGVQAVGRCMGWQLLASSSHLGAGPVEPLANASSCLLASPNGDRMIAIRCEPSVGIQVFIAQSPKKDFFVSELVQDKKWENLGGAFKEVKLEKMEGKNFLNKMELLMACLSSPS-