DPOGS212639 | ||
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Transcript | DPOGS212639-TA | 468 bp |
Protein | DPOGS212639-PA | 155 aa |
Genomic position | DPSCF301439 + 218-1325 | |
RNAseq coverage | 31202x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL002544 | 3e-69 | 95.48% |   |
Bombyx | BGIBMGA012546-TA | 4e-59 | 94.81% |   |
Drosophila | RpL24-PA | 5e-62 | 80.00% |   |
EBI UniRef50 | UniRef50_E0VIA6 | 2e-66 | 80.65% | 60S ribosomal protein L24, putative n=2 Tax=Coelomata RepID=E0VIA6_PEDHC |
NCBI RefSeq | NP_001037231.1 | 1e-71 | 95.48% | ribosomal protein L24 [Bombyx mori] |
NCBI nr blastp | gi|112984248 | 2e-70 | 95.48% | ribosomal protein L24 [Bombyx mori] |
NCBI nr blastx | gi|112984248 | 2e-79 | 95.48% | ribosomal protein L24 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005840 | 4.3e-72 | ribosome | |
GO:0006412 | 4.3e-72 | translation | ||
GO:0003735 | 4.3e-72 | structural constituent of ribosome | ||
KEGG pathway | phu:Phum_PHUM222160 | 1e-66 |   | |
  | K02896 (RP-L24e, RPL24) | maps-> | Ribosome | |
InterPro domain | [1-155] IPR000988 | 4.3e-72 | Ribosomal protein L24e | |
[1-65] IPR023441 | 1e-27 | Ribosomal protein L24e domain | ||
[6-44] IPR011017 | 2.4e-07 | TRASH | ||
Orthology group | MCL11959 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212639-TA
ATGAAGATCGGTCTCTGTGCCTACAGCGGTTACAAGATTTACCCTGGCCATGGAAAAACTATGGTTAAGGTGGATGGCAAGAGTTTTACATTCTTAAATTCAAAATGTGAGGCCGCTCATCTGATGAGGAGGAATCCTCGTAAAGTGACATGGACGGTTCTCTACAGGCGTAAGTTTAAGAAAGGTCAGGAAGAGGAACAAGCTAAGAAACGCACACGCAGAACACAAAAGTTCCAGCGTGCTATTGTTGGAGCCACTCTCAGTGACATTATGGCCAAGAGGAACATGAAGCCAGAAGTCAGAAAGGCTCAAAGAGACCAGGCTATTAAAGCTGCAAAGGAGCAGAAAAAGTCATCGAAGGCTGCCAAGAAATCTACTGCACCCCCAACAAAAGCCAAGGCACCTCCCAAAGCAAAGGCTGCCAAAGTCAGTCAGAAGGCTGCACCTCGTGTTGGAGGCAAACGATAA
>DPOGS212639-PA
MKIGLCAYSGYKIYPGHGKTMVKVDGKSFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQKFQRAIVGATLSDIMAKRNMKPEVRKAQRDQAIKAAKEQKKSSKAAKKSTAPPTKAKAPPKAKAAKVSQKAAPRVGGKR-