Monarch geneset OGS2.0

DPOGS212645
TranscriptDPOGS212645-TA618 bp
ProteinDPOGS212645-PA205 aa
Genomic positionDPSCF300319 - 103613-108249
RNAseq coverage39x (Rank: top 73%)
Annotation
HeliconiusHMEL0136319e-2873.91% 
BombyxBGIBMGA013947-TA5e-3294.81% 
Drosophilaotp-PE1e-2297.83% 
EBI UniRef50UniRef50_E0VDM93e-2679.73%Short stature homeobox protein, putative n=1 Tax=Pediculus humanus corporis RepID=E0VDM9_PEDHC
NCBI RefSeqXP_002424223.16e-2779.73%Short stature homeobox protein, putative [Pediculus humanus corporis]
NCBI nr blastpgi|3198910321e-2896.05%orthopedia [Biston betularia]
NCBI nr blastxgi|3198910321e-3396.05%orthopedia [Biston betularia]
Group
Gene OntologyGO:00036771.3e-17DNA binding
GO:00063551.3e-17regulation of transcription, DNA-dependent
GO:00055152.3e-16protein binding
GO:00435651e-14sequence-specific DNA binding
GO:00037001e-14sequence-specific DNA binding transcription factor activity
KEGG pathway 
InterPro domain[62-132] IPR0122871.3e-17Homeodomain-related
[78-133] IPR0090572.3e-16Homeodomain-like
[88-133] IPR0013561e-14Homeobox
Orthology groupMCL18935 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212645-TA
ATGCTTAACAACCTCACTACGGCTCTAGGAGGTCACAAAGAGCAGTGCTCAGAGAGCAAGCTCGATTTGAAGCCGAGCCTGGAGAGACATCATGCACCAGGGGCAAGGCTCCTCGCACACTCTATACGAGCTGACCATTTACAAGATCTGAGAGCGGGTTATTTTCCAGGTGGTATCCATCAGCAGCACAGCGGCCATATGGCCACGGTACCAGTCAGCATGTCCTCATCCACGTCAGACAGCGACAAGCCAGCGAAACAGAAGAGACACAGAACGAGGTTTACACCGGCGCAGCTAAATGAGTTGGAGCGATGCTTCACTAAAACTCATTACCCAGATATATTCATGAGGGAGGAGATAGCCATGCGCATCGGACTGACGGAGAGTAGAGTACAGAACGGCACCTTGCGCGCCTCCCTCTTCGCACGTCGCGTACAAAAGTTGCACTACATTGATACATTTCACGAGGCCTTCTACCTGGAGCGACCTTCGGTCCACGTACAAACAGATTTTATGTGGACTCTACGTGTCGAAACACTCTGCGAGTGGAAGATCGTCGGTGTGGATCGCTTCACTCCGGACGTAACTTTTATGGAGTGTAAAAAGCTGCGGTTGTAA

Protein sequence:

>DPOGS212645-PA
MLNNLTTALGGHKEQCSESKLDLKPSLERHHAPGARLLAHSIRADHLQDLRAGYFPGGIHQQHSGHMATVPVSMSSSTSDSDKPAKQKRHRTRFTPAQLNELERCFTKTHYPDIFMREEIAMRIGLTESRVQNGTLRASLFARRVQKLHYIDTFHEAFYLERPSVHVQTDFMWTLRVETLCEWKIVGVDRFTPDVTFMECKKLRL-