| DPOGS212649 | ||
|---|---|---|
| Transcript | DPOGS212649-TA | 816 bp |
| Protein | DPOGS212649-PA | 271 aa |
| Genomic position | DPSCF300319 - 7293-15272 | |
| RNAseq coverage | 6x (Rank: top 87%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013624 | 1e-52 | 77.86% | |
| Bombyx | BGIBMGA013940-TA | 2e-42 | 68.15% | |
| Drosophila | Rx-PA | 4e-25 | 87.30% | |
| EBI UniRef50 | UniRef50_D6WQD3 | 4e-34 | 54.49% | Retinal homeobox n=4 Tax=Neoptera RepID=D6WQD3_TRICA |
| NCBI RefSeq | XP_973468.1 | 7e-35 | 54.49% | PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx) [Tribolium castaneum] |
| NCBI nr blastp | gi|91086979 | 1e-33 | 54.49% | PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx) [Tribolium castaneum] |
| NCBI nr blastx | gi|91086979 | 8e-33 | 54.49% | PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx) [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 9.4e-20 | DNA binding | |
| GO:0006355 | 9.4e-20 | regulation of transcription, DNA-dependent | ||
| GO:0005515 | 4e-15 | protein binding | ||
| GO:0043565 | 4.7e-14 | sequence-specific DNA binding | ||
| GO:0003700 | 4.7e-14 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [160-211] IPR012287 | 9.4e-20 | Homeodomain-related | |
| [156-211] IPR009057 | 4e-15 | Homeodomain-like | ||
| [166-211] IPR001356 | 4.7e-14 | Homeobox | ||
| Orthology group | MCL26150 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212649-TA
ATGGACGTGTCCGAGGACAGACTGTACGAGGCTCAGACGCCGGACCGCTCCGACACCAACAGTCCGAGATCGCAGATGAGCAGCCCCAACTCCGCCTCCTCCATCAACGTGACCGACCAATCGATATCGCTGACGCAGCACCAACAGAACCTGGAGACTCTGAACCGCATGGGGCTGTTCTTCCACCAGCAAATGCACCTGAACCAAAGCTTCGACGCCGTGAAGAGCCGCCTCGGCCTGACCCAGGGCGGCGTGAGCCACGGCCCGCGGCACACCATAGACGCCATCCTGGGCTTGAGCGGCAGACAGAGGGTCGCGGACTACGAGCCGCGGAGAGACGACCCTTGTGATGCTGTGCCGGTGTCGCCCGGAGCCGTCGAGAGCGCCGGTGAAGGTTCCTGCAATAGTAACGATGGGTTCCAACCGCCGGCGGAGGACAAGTCGGCCAGCGACGACGAAGCGCCCCGGCCGGGGTCCGCGGACAAGAAGAAGCATCGCAGGAACAGAACCACCTTCACCACCTATCAGCTGCACGAACTAGAACGAGCCTTCGAGAAGAGTCACTACCCTGACGTATACTCCAGAGAGGAACTGGCCATGAAGGTGAACCTGCCAGAAGTCAGAGTGCAGAATCGACTCGAGGGTTCGATCCATAATGAACCTAAGGGGCTTATGTCACTCAATTCCCTATACGCAAGACGAACATATGTCAAACTGGTGCCAACGTTTCAAAAACTCTCAAAACCCCCCTTCGCCGTACAATCGAAAGGGAACAGAAACGATCGCTGGGCTCGTTCTAAAGTGGACGCTCTCTAA
>DPOGS212649-PA
MDVSEDRLYEAQTPDRSDTNSPRSQMSSPNSASSINVTDQSISLTQHQQNLETLNRMGLFFHQQMHLNQSFDAVKSRLGLTQGGVSHGPRHTIDAILGLSGRQRVADYEPRRDDPCDAVPVSPGAVESAGEGSCNSNDGFQPPAEDKSASDDEAPRPGSADKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQNRLEGSIHNEPKGLMSLNSLYARRTYVKLVPTFQKLSKPPFAVQSKGNRNDRWARSKVDAL-