| DPOGS212757 | ||
|---|---|---|
| Transcript | DPOGS212757-TA | 339 bp |
| Protein | DPOGS212757-PA | 112 aa |
| Genomic position | DPSCF300012 + 744666-745895 | |
| RNAseq coverage | 18834x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008607 | 5e-31 | 89.29% | |
| Bombyx | BGIBMGA013157-TA | 1e-28 | 78.57% | |
| Drosophila | RpLP2-PA | 7e-24 | 78.46% | |
| EBI UniRef50 | UniRef50_P05389 | 2e-21 | 78.46% | 60S acidic ribosomal protein P2 n=46 Tax=Opisthokonta RepID=RLA2_DROME |
| NCBI RefSeq | XP_002135702.1 | 5e-35 | 69.30% | GA27615 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastp | gi|198462065 | 1e-33 | 69.30% | GA27615 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastx | gi|18253045 | 4e-47 | 88.39% | 60S acidic ribosomal protein P2 [Spodoptera frugiperda] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 2e-26 | ribosome | |
| GO:0005622 | 2e-26 | intracellular | ||
| GO:0006414 | 2e-26 | translational elongation | ||
| GO:0003735 | 2e-26 | structural constituent of ribosome | ||
| GO:0006412 | 7.1e-07 | translation | ||
| KEGG pathway | dpo:Dpse_GA27615 | 2e-34 | ||
| K02943 (RP-LP2, RPLP2) | maps-> | Ribosome | ||
| InterPro domain | [17-111] IPR001813 | 2e-26 | Ribosomal protein 60S | |
| [21-32] IPR001859 | 7.1e-07 | Ribosomal protein P2 | ||
| Orthology group | MCL12568 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212757-TA
ATGCGTTACGTGGCCGCGTATTTGTTAGCTGTGCTCGGTGGAAAGGCTTCCCCAGCAGCCTCAGACCTTGAGAAGATCCTCAGTTCCGTCGGTATCGAAGCTGATTCTGAGAGATTGAAGAAAGTCATCGATGAACTCAGCGGCAAGACCGTCGAGGACCTGATCGCCCAAGGTCGTGAGAAGCTGTCAGCCATGCCAGCTGGAGGTGCTGCACCAGCTGCTGCTGCCGCCGCTGCACCTGCCGCTGCCGCTGCTGAGGAGAAGAAAGAAGAGAAGGAGGCCAAGAAAGAAGAATCTGAATCTGAAGATGAAGATATGGGCTTCGGTCTCTTTGACTAA
>DPOGS212757-PA
MRYVAAYLLAVLGGKASPAASDLEKILSSVGIEADSERLKKVIDELSGKTVEDLIAQGREKLSAMPAGGAAPAAAAAAAPAAAAAEEKKEEKEAKKEESESEDEDMGFGLFD-