Monarch geneset OGS2.0

DPOGS212780
TranscriptDPOGS212780-TA774 bp
ProteinDPOGS212780-PA257 aa
Genomic positionDPSCF300012 + 1261570-1268921
RNAseq coverage30x (Rank: top 76%)
Annotation
HeliconiusHMEL0070581e-2574.29% 
BombyxBGIBMGA013222-TA3e-2054.55% 
Drosophila% 
EBI UniRef50%
NCBI RefSeq%
NCBI nr blastp%
NCBI nr blastx%
Group
Gene OntologyGO:00160202.8e-05membrane
GO:00052722.8e-05sodium channel activity
GO:00068142.8e-05sodium ion transport
KEGG pathway 
InterPro domain[6-70] IPR0193214.5e-09Nuclear pore complex, nucleoporin 88
Orthology groupMCL19612 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212780-TA
ATGGATTTCCAATTATTTGAAACAAAATTGGCCAAACATAAAATATTTCAGGACATGAAAGAAAGTTTAAAAAACAATTTCGATAACAAACTGCGTAATTTGTTAGAACTTAAGGACGATGTGCTTTTCGCTTGGAATTCCGTTGAGAATTGTTTGTATAGTGTAAACTTAAAGAGGCTCGAAGAAGATCAAGAAGAAACTCCATATCAGGTGATGGAAGACAGCAACATCAAAGTGAGTAACGGAGAAAAAATCAAAGCGATCTGGACTCCGGTGATGACGGAGCTCGGAGTGTGTCACACACTCAACTCCGTAGCCACCGCTGACATAGCCATCTTCAAATCCAACGCGAGCAATACTAAAGACAATCCGATGACTTGCCAAGCGGACACCAACGGCTGCTTCTTGTATCTGGAGTGCGCTTCTCAGATAGACTACTATCTTCACTCTCCATACGATGTGGTCGACTACACGGAAGCACATACCACCACCTCCCCACCACTCATCGCACACGTGGACGTCACCACCACGGAGATAGGAGTGGGCCCAGGAGTGAGAGCTCTCCTGCCGAGGAGACGTCAGTGCCTGTTCACTGATGAACCCACCACAGCCTCCAGACAGTACTGCGAGAGATCGGTGTCTCCAGTTAGTTTATCTACATATTCAGCTGTGTCGCTGATGGCGTTACGAATAATCCCCGAACACCACCGAAGTTTCCATAAAGCCCTGAGTCCTGACGACTTCCACCTAAGTCTTAAGGCCCGGAGGAGATAA

Protein sequence:

>DPOGS212780-PA
MDFQLFETKLAKHKIFQDMKESLKNNFDNKLRNLLELKDDVLFAWNSVENCLYSVNLKRLEEDQEETPYQVMEDSNIKVSNGEKIKAIWTPVMTELGVCHTLNSVATADIAIFKSNASNTKDNPMTCQADTNGCFLYLECASQIDYYLHSPYDVVDYTEAHTTTSPPLIAHVDVTTTEIGVGPGVRALLPRRRQCLFTDEPTTASRQYCERSVSPVSLSTYSAVSLMALRIIPEHHRSFHKALSPDDFHLSLKARRR-