Monarch geneset OGS2.0

DPOGS212782
TranscriptDPOGS212782-TA1809 bp
ProteinDPOGS212782-PA602 aa
Genomic positionDPSCF300012 + 1318161-1326390
RNAseq coverage234x (Rank: top 44%)
Annotation
HeliconiusHMEL0070573e-6652.36% 
BombyxBGIBMGA013223-TA3e-7959.07% 
Drosophilambo-PA3e-3325.51% 
EBI UniRef50UniRef50_C3Z4B23e-5028.31%Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3Z4B2_BRAFL
NCBI RefSeqXP_002731784.11e-4227.52%PREDICTED: nucleoporin 88-like [Saccoglossus kowalevskii]
NCBI nr blastpgi|3504016151e-5029.19%PREDICTED: nuclear pore complex protein Nup88-like [Bombus impatiens]
NCBI nr blastxgi|2608036719e-5228.31%hypothetical protein BRAFLDRAFT_122018 [Branchiostoma floridae]
Group
Gene OntologyGO:00055154.6e-05protein binding
KEGG pathway 
InterPro domain[67-600] IPR0193213.7e-57Nuclear pore complex, nucleoporin 88
Orthology groupMCL15230 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212782-TA
ATGTGGATTGTAATGCTGGCAGAGATCGGCCGGCGCTACCTCGCGCCCCCCTCCCGTCCGCTCCCCCCTCCTGCCTCCTCCCCACACGACCGACGGCTCCCGTTCCCAGTCTCCGCCGAACCCCCTCCTGCCGTTCCCTTCCTCACCGAGGGCGCCTTCCGCGATCCTCACCTAATGAGTGTTTGTATCAATTTGAGTTCGACTGTAGACGAGAGGTTCCTGTACTCTCAAGGCGAGATACACAGAGTACACTGGCATCCGAAATCTCTCTCCCACATATTGGTGCTGGTCTCGGACAACACGATGAGACTGTACAACATAGCACTGAAGACTGGACCGAAATTGGTGAAAATCTTCACAATCGGACCCAAGCCGGCGGGAGCGTTGGGTCAGACTGTGTTGGATAGTTTAGGAGATACAGCGATAGACTTCACACCTACACCAGACAACGAATATCTGTTGATACTCAGCGGCAATGGTGACGTGTACATGCTGCAGTGCGAGTTGGATATGAAAAATACCATAACAGCTAAATTGAGGGGTCCCCTGGCGATGTACCCCCCAGCTGATGATAATTACGGCTCCGAGTCCTGCTCCATAACGGCTGTGGGGTCAGCGAAGACCCCAACGCTGGTTATCATAGCCAGCGCTTCAGCAACCCTGTACCATTGCCTTCTATTGCCAAACTCCACAGACAAAGAAGAGGACGACGGCTTCGCACTCTACGTTCTAGAGTCGGTCGAATTGAATCTCGTGCAGAACAGCGACAGCCACAACAGCAACATATATCCAGTGCATTTATATCCGTCCGGCCGCGGTTCGTATGTGTGTGTTCACGATAGCGGGGTCCATTCTGTGTTACTACCAGCGGCTAACGTCCTGCATGAATACGCTTCAGCTCGCGAAGATGAGATGGAATCAGTACTTCAGCTAATGTATAAGGAGCCGAGCAAAGCACGTCACCTCATATGCGGTAGCAATCCGCCTGTTGGGGTGACCTTCACAGAACCGCCCCTCCAGACGATCATCATATTATGCCAGGAAGGTGACCTCTTGACCAGAACCGTAGATCCCTTCGACCTAGAGGAACATCTCTATAAGGAGGTACAATTGAAAAACCCGGCTCTAGAACAAGACGATATCAACGCTATACTAAAAGAGAAACAGAAGATAACTTTCAGTCACATAATACACGAGGTTCTCCAACGTAATTCATCACAGCCGATTTTGAAGTTACAATCCGCTCCAAGGACCAAGCAGTGTTTAGAGTTACTCACCCAAGCGACTGTGAGACTCGGCAGCGAATATATGGATAAACAGAAACGCGCTTGTGACGTCATCACTAGGAAGATGGCCGCCCTCAGCGCCCTCTCAAGGCAACACAAGGAATGGCTACGGGAGCTACAGAAAGAAATTGAAGATGTTAAACTCACGTCAGTGGTGTTGAAGGAGAAGCGTGCGTTGGCGGAAAAGCATCAAGAAGATATAAAGTACAGATGTTCTATGGTGTCCCGAGCTTTGCGAGCTGGCTCCGGACAATCGGAAGACGAGAGAAGACAGCTGAAAGAGCTGGAAGAAGTTAGAGTGCGGACACAACAGCTGCAAGGACAGCTGGAAGATACCAGAAGCCTGGTCCGGAGTAGAGGAATACAGATAAGGAATTGGCAAGAAGATTATATGAAGAAGAACACGGTTCTGGGTAAATCTCACAGTGACAGCATCACATCTATACTGCAGCAACAGACAACACAAATATCGACACTCATAGAAGAAACGAAGCTACTGAAGGATCAACTCGGGATCGTTTAA

Protein sequence:

>DPOGS212782-PA
MWIVMLAEIGRRYLAPPSRPLPPPASSPHDRRLPFPVSAEPPPAVPFLTEGAFRDPHLMSVCINLSSTVDERFLYSQGEIHRVHWHPKSLSHILVLVSDNTMRLYNIALKTGPKLVKIFTIGPKPAGALGQTVLDSLGDTAIDFTPTPDNEYLLILSGNGDVYMLQCELDMKNTITAKLRGPLAMYPPADDNYGSESCSITAVGSAKTPTLVIIASASATLYHCLLLPNSTDKEEDDGFALYVLESVELNLVQNSDSHNSNIYPVHLYPSGRGSYVCVHDSGVHSVLLPAANVLHEYASAREDEMESVLQLMYKEPSKARHLICGSNPPVGVTFTEPPLQTIIILCQEGDLLTRTVDPFDLEEHLYKEVQLKNPALEQDDINAILKEKQKITFSHIIHEVLQRNSSQPILKLQSAPRTKQCLELLTQATVRLGSEYMDKQKRACDVITRKMAALSALSRQHKEWLRELQKEIEDVKLTSVVLKEKRALAEKHQEDIKYRCSMVSRALRAGSGQSEDERRQLKELEEVRVRTQQLQGQLEDTRSLVRSRGIQIRNWQEDYMKKNTVLGKSHSDSITSILQQQTTQISTLIEETKLLKDQLGIV-