| DPOGS212793 | ||
|---|---|---|
| Transcript | DPOGS212793-TA | 669 bp |
| Protein | DPOGS212793-PA | 222 aa |
| Genomic position | DPSCF300489 + 12250-16876 | |
| RNAseq coverage | 108x (Rank: top 60%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011200 | 2e-81 | 64.86% | |
| Bombyx | BGIBMGA013340-TA | 1e-77 | 60.36% | |
| Drosophila | Dhfr-PA | 4e-37 | 33.49% | |
| EBI UniRef50 | UniRef50_Q9U8B8 | 1e-75 | 61.26% | Dihydrofolate reductase n=2 Tax=Obtectomera RepID=DYR_HELVI |
| NCBI RefSeq | XP_001605781.1 | 5e-41 | 41.44% | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] |
| NCBI nr blastp | gi|25090191 | 4e-75 | 61.26% | dihydrofolate reductase [Heliothis virescens] |
| NCBI nr blastx | gi|25090191 | 5e-73 | 61.26% | dihydrofolate reductase [Heliothis virescens] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0050661 | 1.3e-60 | NADP binding | |
| GO:0009165 | 1.3e-60 | nucleotide biosynthetic process | ||
| GO:0055114 | 1.3e-60 | oxidation-reduction process | ||
| GO:0006545 | 1.3e-60 | glycine biosynthetic process | ||
| GO:0004146 | 1.3e-60 | dihydrofolate reductase activity | ||
| GO:0016491 | 3.5e-42 | oxidoreductase activity | ||
| KEGG pathway | nvi:100122177 | 1e-40 | ||
| K00287 (folA) | maps-> | One carbon pool by folate | ||
| Folate biosynthesis | ||||
| InterPro domain | [5-222] IPR012259 | 1.3e-60 | Dihydrofolate reductase | |
| [4-123] IPR024072 | 3.5e-42 | Dihydrofolate reductase-like domain | ||
| [5-123] IPR001796 | 1.5e-26 | Dihydrofolate reductase domain | ||
| Orthology group | MCL14185 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212793-TA
ATGTCTAAAGTTAAGTTAAATTTAATAGCAGCTGCCTGTGAAAACATGGGTATTGGTAGCAACGGATCGCTGCCGTGGAGACTGAAAAAAGAAATGGAATACTTCACGACAATGACGACTAAAGTCAAAGATGCATCGAAAATCAACGCTGTGATTATGGGAAGGAGGACTTGGGATTGCATTCCGAATAAAAACAGACCTCTGGAAAACAGACTGAATATTGTACTCACGCGGCATGTGGATGTTATCAAAGACAAGGTCCCTAAGGATGTTGTGGTTGTGTCCGGCTTAGATGAAGCCGTAAGCTATATTATTGATAGGAACGATGTTGAATCCACTTGGGTTATTGGAGGTTCGTCGGTATATCAGGTCCCTAAGGATGTTGTGGTTGTGTCCGGCTTAGATGAAGCCGTAAGCTATATTATTGATAGGAACGATGTTGAATCCACTTGGGTTATTGGAGGTTCGTCTGTATATCAGGCATCAATGGATCATCCAAATTGTGGGAAGATTTATTTGACTGAAATACAAAAAACTTTTGATTGTGACACATTCTTCCCGAACATCAACAGACAACGGTTCCATCTCGTTGATGAAGATGATATACCCAGGGATATACAGACGGAGGGAGATATTAGTTACTATTTTAGAGTTTACAAACGACTCTAA
>DPOGS212793-PA
MSKVKLNLIAAACENMGIGSNGSLPWRLKKEMEYFTTMTTKVKDASKINAVIMGRRTWDCIPNKNRPLENRLNIVLTRHVDVIKDKVPKDVVVVSGLDEAVSYIIDRNDVESTWVIGGSSVYQVPKDVVVVSGLDEAVSYIIDRNDVESTWVIGGSSVYQASMDHPNCGKIYLTEIQKTFDCDTFFPNINRQRFHLVDEDDIPRDIQTEGDISYYFRVYKRL-