| DPOGS212817 | ||
|---|---|---|
| Transcript | DPOGS212817-TA | 765 bp |
| Protein | DPOGS212817-PA | 254 aa |
| Genomic position | DPSCF300086 - 415636-435969 | |
| RNAseq coverage | 39x (Rank: top 73%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008187 | 2e-98 | 98.81% | |
| Bombyx | BGIBMGA000762-TA | 5e-33 | 98.48% | |
| Drosophila | scro-PA | 4e-78 | 76.17% | |
| EBI UniRef50 | UniRef50_B4NA09 | 1e-76 | 75.38% | GK10842 n=7 Tax=Coelomata RepID=B4NA09_DROWI |
| NCBI RefSeq | XP_001998158.1 | 3e-78 | 76.88% | GI23787 [Drosophila mojavensis] |
| NCBI nr blastp | gi|195107108 | 5e-77 | 76.88% | GI23787 [Drosophila mojavensis] |
| NCBI nr blastx | gi|195446433 | 6e-80 | 56.27% | GK10842 [Drosophila willistoni] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 7.2e-25 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 7.2e-25 | sequence-specific DNA binding | ||
| GO:0003700 | 7.2e-25 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 2.9e-23 | DNA binding | ||
| GO:0005515 | 3.8e-23 | protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [111-173] IPR001356 | 7.2e-25 | Homeobox | |
| [101-172] IPR012287 | 2.9e-23 | Homeodomain-related | ||
| [85-172] IPR009057 | 3.8e-23 | Homeodomain-like | ||
| Orthology group | MCL12870 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212817-TA
ATGACAGGAAAATTGACGTCCAACTCGTCAGGCAGCAGCATCAACTCCCCCCTGGGGCCGGCGGCGTCCTGCGGGATGGCCGGGAACCCTTACGCGGTGCCGCTGTACGGCGGGGCTCCGGTCCAAGGTTACGGCTGCGCGCCCGCGGACCTCCCGCACTATGGGGACATGCGCGGCGCGAGCTGGTACCCCGCCTCCAACGACCCCAGGTTTGCCATTTCCAGGCTGATGACCTCAACGTCGGGCGGTATGGGCCACGTCAACAACATGGGTGGACTGGCGGCCTGCGCTGGACCTGATGCGAAGCCAATGCAGTTCCCACTAGCGCAGAGGCGTAAGAGAAGAGTACTGTTCACACAGGCACAGGTGTACGAGCTGGAGAGGAGGTTTAAGCAGCAGAAGTACCTGTCGGCGCCGGAGAGGGAACACCTAGCGTCGCTCATACACCTCACGCCGACCCAGGTCAAAATTTGGTTCCAAAATCACCGCTACAAATGCAAACGACAGGCGAAGGAGAAGGCGATGGCGGAACAGAATCAACACAATCAGTCGGCGTCTTCTCCGCGTCGTGTGGCGGTGCCAGTGCTGGTGAAGGACGGCAAGCCGTGCGGGTCGGGCGAGTCCTCGTCCCCGGCACACTGCGCCACCCCCACCAGCTACCCGGCGCCCCAGCAGGCCGCCTGCAGCAACCTGTCGTACCGCCAGCCCGCCGCCTACCAGCAGCAGTGCTCCGGCTACCTGCCGCTGCAAGGACGAGCCTGGTAG
>DPOGS212817-PA
MTGKLTSNSSGSSINSPLGPAASCGMAGNPYAVPLYGGAPVQGYGCAPADLPHYGDMRGASWYPASNDPRFAISRLMTSTSGGMGHVNNMGGLAACAGPDAKPMQFPLAQRRKRRVLFTQAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQSASSPRRVAVPVLVKDGKPCGSGESSSPAHCATPTSYPAPQQAACSNLSYRQPAAYQQQCSGYLPLQGRAW-