DPOGS212842 | ||
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Transcript | DPOGS212842-TA | 582 bp |
Protein | DPOGS212842-PA | 193 aa |
Genomic position | DPSCF300086 + 144956-146064 | |
RNAseq coverage | 167x (Rank: top 51%) |
Annotation | ||||
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Heliconius | HMEL004481 | 6e-93 | 97.63% |   |
Bombyx | BGIBMGA000787-TA | 8e-85 | 91.58% |   |
Drosophila | Poxm-PC | 2e-65 | 90.70% |   |
EBI UniRef50 | UniRef50_UPI0000DB74A4 | 1e-66 | 96.88% | UPI0000DB74A4 related cluster n=1 Tax=unknown RepID=UPI0000DB74A4 |
NCBI RefSeq | XP_975478.1 | 2e-68 | 77.33% | PREDICTED: similar to Pax-1 protein [Tribolium castaneum] |
NCBI nr blastp | gi|270010988 | 2e-67 | 77.33% | pox meso [Tribolium castaneum] |
NCBI nr blastx | gi|380029723 | 2e-69 | 73.20% | PREDICTED: uncharacterized protein LOC100870845 [Apis florea] |
Group | ||||
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Gene Ontology | GO:0003677 | 9e-89 | DNA binding | |
GO:0006355 | 9e-89 | regulation of transcription, DNA-dependent | ||
GO:0005515 | 6e-40 | protein binding | ||
KEGG pathway |   | |||
InterPro domain | [6-130] IPR001523 | 9e-89 | Paired box protein, N-terminal | |
[7-131] IPR009057 | 6e-40 | Homeodomain-like | ||
[9-74] IPR011991 | 1.5e-36 | Winged helix-turn-helix transcription repressor DNA-binding | ||
Orthology group | MCL12618 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212842-TA
ATGGTGGGCGCGCAGCAGTACGGGGAAGTCAACCAGCTGGGAGGGGTGTTCGTCAACGGACGGCCGCTACCGAACGCCGTCAGGCTCAGGATCGTGGAGCTCGCTCAGCTCGGCATCAGACCGTGCGACATCAGTCGTCAGCTGCGCGTGTCTCACGGCTGCGTGTCCAAGATCCTGGCGCGGTATCACGAGACGGGCTCTATACTGCCGGGAGCCATCGGGGGCTCCAAACCGAGGGTCACCACGCCCAAAGTCGTGTCCTACATCAAGCAGTTAAAAGCGAAGGACCCGGGCATCTTCGCCTGGGAGATTCGTGACAGACTGCTGGCCGACGGAGTCTGTGACAAGTACAACGTGCCCTCAGTGTCCAGCATCAGTCGCATCCTCAGAAATAAGCTGGGTGGTCCGCTGTACCCCGTGCCTCCGCTGTACCCCGTTCCACCTCAGAGATGCTGGCCTCTGCACCAACCCTACGACTATTACGTGTACTTGCAGGGTCGCCAGCAGGCCGGTGTGCCTCACGGACTGACTCACGGACACGGCCCGGCCGTCCCGCACCACGCACACACACACGCTCTATGA
>DPOGS212842-PA
MVGAQQYGEVNQLGGVFVNGRPLPNAVRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYHETGSILPGAIGGSKPRVTTPKVVSYIKQLKAKDPGIFAWEIRDRLLADGVCDKYNVPSVSSISRILRNKLGGPLYPVPPLYPVPPQRCWPLHQPYDYYVYLQGRQQAGVPHGLTHGHGPAVPHHAHTHAL-