DPOGS212860 | ||
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Transcript | DPOGS212860-TA | 327 bp |
Protein | DPOGS212860-PA | 108 aa |
Genomic position | DPSCF300086 + 343296-343856 | |
RNAseq coverage | 9597x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL008195 | 8e-50 | 87.85% |   |
Bombyx | BGIBMGA000804-TA | 9e-22 | 74.19% |   |
Drosophila | ATPsyn-Cf6-PB | 5e-26 | 54.37% |   |
EBI UniRef50 | UniRef50_E3UPD0 | 8e-44 | 81.48% | ATP synthase-coupling factor 6, mitochondrial n=1 Tax=Antheraea yamamai RepID=E3UPD0_ANTYA |
NCBI RefSeq | NP_001091814.1 | 4e-41 | 76.64% | mitochondrial ATP synthase coupling factor 6 [Bombyx mori] |
NCBI nr blastp | gi|309951476 | 3e-43 | 81.48% | mitochondrial ATP synthase coupling factor [Antheraea yamamai] |
NCBI nr blastx | gi|309951476 | 4e-42 | 81.48% | mitochondrial ATP synthase coupling factor [Antheraea yamamai] |
Group | ||||
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Gene Ontology | GO:0015986 | 1.9e-43 | ATP synthesis coupled proton transport | |
GO:0000276 | 1.9e-43 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | ||
GO:0015078 | 1.9e-43 | hydrogen ion transmembrane transporter activity | ||
KEGG pathway | tca:657737 | 3e-28 |   | |
  | K02131 (ATPeF0F6, ATP5J) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [1-103] IPR016349 | 1.9e-43 | ATPase, F0 complex, subunit F6, mitochondrial subgroup | |
[2-105] IPR008387 | 6.5e-40 | ATPase, F0 complex, subunit F6, mitochondrial | ||
Orthology group | MCL13299 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212860-TA
ATGCTGACTTCTTCACTCCTTGGCGGTCTCCGAGCGGCACGCTCTTCTGTCGTGATCACTAGAAACCTCGCAGCGGCACAGAAGGCCACAGACCCCATCCAACAGCTATTCTTGGACAAAATTAGAGAGTACAAACAGAAGAGTGTTGGCGGCAAGCTTGTCGAGCCAAGCCCTGCTATTGAAAAGGAACTGAAAACTGAACTCGAAAAGCTGGAACGTCAATATGGAGGAGGTTCCGGTGTGGACATGACATCCTTCCCGAGCTTCAAGTTCGATGAACCCAAGCTAGACCCTATCGATGAAGTTGCTGCCCAAGCCAAGAAGTGA
>DPOGS212860-PA
MLTSSLLGGLRAARSSVVITRNLAAAQKATDPIQQLFLDKIREYKQKSVGGKLVEPSPAIEKELKTELEKLERQYGGGSGVDMTSFPSFKFDEPKLDPIDEVAAQAKK-