DPOGS212907 | ||
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Transcript | DPOGS212907-TA | 762 bp |
Protein | DPOGS212907-PA | 253 aa |
Genomic position | DPSCF300285 - 106520-107973 | |
RNAseq coverage | 116x (Rank: top 58%) |
Annotation | ||||
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Heliconius | HMEL004239 | 5e-89 | 81.50% |   |
Bombyx | BGIBMGA013985-TA | 1e-114 | 77.38% |   |
Drosophila | CG13367-PA | 1e-43 | 53.47% |   |
EBI UniRef50 | UniRef50_E2BYA9 | 1e-64 | 53.20% | GATA zinc finger domain-containing protein 1 n=7 Tax=Endopterygota RepID=E2BYA9_HARSA |
NCBI RefSeq | XP_967180.2 | 5e-70 | 54.18% | PREDICTED: similar to GATA zinc finger domain-containing protein 1 (Ocular development-associated gene protein) [Tribolium castaneum] |
NCBI nr blastp | gi|189239721 | 9e-69 | 54.18% | PREDICTED: similar to GATA zinc finger domain-containing protein 1 (Ocular development-associated gene protein) [Tribolium castaneum] |
NCBI nr blastx | gi|189239721 | 2e-68 | 54.18% | PREDICTED: similar to GATA zinc finger domain-containing protein 1 (Ocular development-associated gene protein) [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0006355 | 4.3e-06 | regulation of transcription, DNA-dependent | |
GO:0043565 | 4.3e-06 | sequence-specific DNA binding | ||
GO:0008270 | 4.3e-06 | zinc ion binding | ||
GO:0003700 | 4.3e-06 | sequence-specific DNA binding transcription factor activity | ||
KEGG pathway |   | |||
InterPro domain | [6-32] IPR000679 | 4.3e-06 | Zinc finger, GATA-type | |
Orthology group | MCL13008 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212907-TA
ATGCCTAAACCGACTTGTGTTCAATGTAATACAAACGATTCCCTACTATGGAGAAGCGCTGAAAACGGACAAATATGCAACGAATGCCACTTAGCAAATACCGCAAGTAGTGAAACAAATTTAGATACGGCCATCAAAACCGAAAATGATGACAAGAAAGAAGACAAAGACGATTGTGATAGTAAGAATGGAAAAAATGAAGGCGAGACCACTCCAGCAAAAGCAACGGGTAAAGGTACGAGGAAAAGCACTCGTTCTACAAGGTACAAAGCTAAAGGACCAACAGTGAACCAATCAAAACCACCGGCACCCCGTGGTAGAGGTCGCAGAAGTATATTTAAGAGACAACCATTAAAAGCCCCAACAGCGACGGCTACAGTTGTTGCGAGTGAATCAGTATTTTTCAAGGGTACATACATTCAAGTTGGCGATATCGTTTCAATGATTGACATTGACGGCGGCACATACTATGCACAGATAAGAGGTTTCCTTACAGATCAGTACTGTGAGAAAAGTGCCGTAGTCACTTGGCTGCTACCAACACAGGCCAGTCCGCCCCCAGACCAAAGTTTTGATCCAGCTACATACATTATAGGTCCAGAAGAAGATCTTCCTCGTAAACTGGAATACATGGAATTTGTAATGCATGCACCTTCAGACTACTATAAATCCAGTACAAGCCCATATCCCCTCACCGACAGGGAGCTAAATAACCAAAGTGGTTTCATATGGACCTCTATGGAATCTAAGGAAAGAGGATAA
>DPOGS212907-PA
MPKPTCVQCNTNDSLLWRSAENGQICNECHLANTASSETNLDTAIKTENDDKKEDKDDCDSKNGKNEGETTPAKATGKGTRKSTRSTRYKAKGPTVNQSKPPAPRGRGRRSIFKRQPLKAPTATATVVASESVFFKGTYIQVGDIVSMIDIDGGTYYAQIRGFLTDQYCEKSAVVTWLLPTQASPPPDQSFDPATYIIGPEEDLPRKLEYMEFVMHAPSDYYKSSTSPYPLTDRELNNQSGFIWTSMESKERG-