DPOGS212914 | ||
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Transcript | DPOGS212914-TA | 573 bp |
Protein | DPOGS212914-PA | 190 aa |
Genomic position | DPSCF300285 + 1648-5485 | |
RNAseq coverage | 0x (Rank: top 99%) |
Annotation | ||||
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Heliconius | HMEL007369 | 5e-09 | 31.03% |   |
Bombyx | BGIBMGA013906-TA | 2e-56 | 88.89% |   |
Drosophila | SP2353-PA | 1e-30 | 48.00% |   |
EBI UniRef50 | UniRef50_B7Q2R1 | 4e-29 | 51.75% | Putative uncharacterized protein n=1 Tax=Ixodes scapularis RepID=B7Q2R1_IXOSC |
NCBI RefSeq | XP_001600956.1 | 2e-32 | 53.51% | PREDICTED: similar to ENSANGP00000003646 [Nasonia vitripennis] |
NCBI nr blastp | gi|307180989 | 2e-31 | 56.03% | EGF-like, fibronectin type-III and laminin G-like domain-containing protein [Camponotus floridanus] |
NCBI nr blastx | gi|307203604 | 1e-29 | 56.03% | EGF-like, fibronectin type-III and laminin G-like domain-containing protein [Harpegnathos saltator] |
Group | ||||
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KEGG pathway | bta:525795 | 2e-12 |   | |
  | K06254 (AGRN) | maps-> | ECM-receptor interaction | |
InterPro domain | [65-177] IPR008985 | 1.4e-16 | Concanavalin A-like lectin/glucanase | |
[68-167] IPR013320 | 4e-15 | Concanavalin A-like lectin/glucanase, subgroup | ||
[68-162] IPR012679 | 9.2e-11 | Laminin G, subdomain 1 | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212914-TA
ATGTTAAAAGAGAGCTCTCATGCGCTGGATGAATTGTCAAATCAGACGCTCCATACATTTAAGTTTAACTGGTTTCCGTTGTTGGAGTTCTTGAAGTTTACCGAGTTTAAGGAAGCTCGGGAGTTTACGGACATCTCTAGATTAAATCACGTATTTGAGGCAGTTAAATTTATTAAGGATGCCTCCTGTGTTATCATATGGAAATTCGATTGTGGTAGCGGCGCAGGTGTGCTGCGGTCTCCTGAACCAGTTCATCTTGGTAGATGGAACACCATATCTGTTTATCGACACAGATGGGACGCCTGGCTCAAACTGAATAATGGGAAACGAGTGCGCGGGAGATCGAAAGGCCTCTTCTCGCGGATGACCTTCCGGGAGCCTGTGTGGGTCGGAGGTGCTGGTAACACTACTGGTTTGCAGAACAAGCTCGGCCTCTCCGAAGGATTGCTCGGCTGCGTCGACTTCTTGAGAATTAACGGTGACAGTTACCGTCTAGTGAAAGATGCTGTCTCCACACTTGATATCGACAATGTGAAGAATAAATTAGAAACTAAATATGAAAAACAGAAATGA
>DPOGS212914-PA
MLKESSHALDELSNQTLHTFKFNWFPLLEFLKFTEFKEAREFTDISRLNHVFEAVKFIKDASCVIIWKFDCGSGAGVLRSPEPVHLGRWNTISVYRHRWDAWLKLNNGKRVRGRSKGLFSRMTFREPVWVGGAGNTTGLQNKLGLSEGLLGCVDFLRINGDSYRLVKDAVSTLDIDNVKNKLETKYEKQK-