| DPOGS212928 | ||
|---|---|---|
| Transcript | DPOGS212928-TA | 570 bp |
| Protein | DPOGS212928-PA | 189 aa |
| Genomic position | DPSCF300057 - 847277-849229 | |
| RNAseq coverage | 21351x (Rank: top 0%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005643 | 6e-99 | 96.15% | |
| Bombyx | BGIBMGA011620-TA | 8e-97 | 92.31% | |
| Drosophila | RpL18-PA | 4e-68 | 69.23% | |
| EBI UniRef50 | UniRef50_G6D0X3 | 4e-100 | 100.00% | Putative rap55 n=2 Tax=Coelomata RepID=G6D0X3_DANPL |
| NCBI RefSeq | NP_001037217.1 | 2e-95 | 92.31% | 60S ribosomal protein L18 [Bombyx mori] |
| NCBI nr blastp | gi|315115435 | 4e-97 | 96.70% | ribosomal protein L18 [Euphydryas aurinia] |
| NCBI nr blastx | gi|315115435 | 4e-95 | 96.70% | ribosomal protein L18 [Euphydryas aurinia] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.8e-123 | ribosome | |
| GO:0006412 | 1.8e-123 | translation | ||
| GO:0005622 | 1.8e-123 | intracellular | ||
| GO:0003735 | 1.8e-123 | structural constituent of ribosome | ||
| KEGG pathway | tca:656416 | 2e-75 | ||
| K02883 (RP-L18e, RPL18) | maps-> | Ribosome | ||
| InterPro domain | [8-188] IPR000039 | 1.8e-123 | Ribosomal protein L18e | |
| [25-146] IPR021131 | 5.9e-30 | Ribosomal protein L18e/L15P | ||
| Orthology group | MCL14045 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212928-TA
ATGGCAATACTGTCTCTCGCTGGTGTCGACATCAACCATAAACACGACAGGAAAGTCAGGCGTACTGAAGTTAAATCTCAAGATGTATACTTGAGGTTGCTTGTAAAGTTATACAGATACTTGGCGAGACGTACAAATGCCAAGTTCAATCAGATCGTTCTGCGGCGTTTGTTCATGAGCCGTATCAACAGGGCTCCAATTTCCCTGTCTCGTTTGGCTCGCCACATGAAGAAGCCTACCCGTGAAGGACTTATTGCCGTGGTGGTGGGTTCAGTAACCAACGACGTGAGGTTGTACAACGTCCCCAAGCTGACTGTTGCCGCTCTTCACGTCACTGAGAAGGCTCGCGCCCGTATCTTGGCAGCTGGAGGCGAAATCCTAACATTCGACCAGCTAGCACTCCGTGCGCCCACCGGCCGTAAGACAGTCCTCGTCCAGGGCCGTAGGAACGCTCGTGAGGCTGTCCGTCACTTCGGCCCGGCCCCAGGCGCTCCTCGCTCTCACACGAAGCCCTACGTACGTTCCAAGGGACACGAGCGCTCCAGACCTAGCCGTCGCTCTAATGTATAA
>DPOGS212928-PA
MAILSLAGVDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRAPISLSRLARHMKKPTREGLIAVVVGSVTNDVRLYNVPKLTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRSKGHERSRPSRRSNV-