| DPOGS212938 | ||
|---|---|---|
| Transcript | DPOGS212938-TA | 732 bp |
| Protein | DPOGS212938-PA | 243 aa |
| Genomic position | DPSCF300057 - 351849-354334 | |
| RNAseq coverage | 2521x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008244 | 1e-122 | 89.19% | |
| Bombyx | BGIBMGA011870-TA | 4e-119 | 86.94% | |
| Drosophila | CG5703-PA | 1e-86 | 66.52% | |
| EBI UniRef50 | UniRef50_Q1HPR5 | 7e-117 | 86.94% | NADH-ubiquinone reductase n=4 Tax=Opisthokonta RepID=Q1HPR5_BOMMO |
| NCBI RefSeq | NP_001040535.1 | 1e-117 | 86.94% | NADH-ubiquinone reductase [Bombyx mori] |
| NCBI nr blastp | gi|114053075 | 2e-116 | 86.94% | NADH-ubiquinone reductase [Bombyx mori] |
| NCBI nr blastx | gi|114053075 | 2e-120 | 86.94% | NADH-ubiquinone reductase [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0051287 | 9.9e-125 | NAD binding | |
| GO:0055114 | 9.9e-125 | oxidation-reduction process | ||
| GO:0016491 | 9.9e-125 | oxidoreductase activity | ||
| KEGG pathway | tca:657790 | 1e-93 | ||
| K03943 (NDUFV2) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-221] IPR002023 | 9.9e-125 | NADH:ubiquinone oxidoreductase, 24kDa subunit | |
| [48-225] IPR012336 | 2.3e-58 | Thioredoxin-like fold | ||
| Orthology group | MCL14073 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212938-TA
ATGTTATCCAGCTTAAGGTCTGGAGTGAAGGGCTTGTGGAGGACATCAGCAAGAAGTCTTCAAACAACAGCAAAATTGCAGCATGATAGTTTATTTGTGCACCGTGACTCACCCGAGGACAACCCTAGTATACCCTTTGAATTTACGCCTGAAAACCAAAAGCGAGCTGATGCTCTTCTAGAAATTTATCCCGAGGGCCACAAGAGGGCAGCAATGATCCCGCTTTTGGATCTTGCTCAGCGTCAGAATGGTGGCTGGCTACCAATATCAGCCATGCATAAGGTTGCTGAACTACTGAACCTACCTCGTATGAGAGTGTATGAAGTTGCCACCTTTTACACCATGTTTATAAGGCGTCCAATTGGTAAATATCATATTCAAGTGTGCACAACTACACCATGTTGGTTAAGGGGTTCTGATACAGTGTTGAATGCTATCAAGGAAGCCACCGGTTGTGAGGTCGGAGGGAACAGTCCCTGCGGCAAGTTTTCTATATCAGAGGTTGAATGTCTTGGTGCATGTGTCAATGCTCCAATGATCCAAGTCAATGACGATTACTATGAAGACTTGACAGTTGAAGACTCGAAGGAAATTATTAATAAACTAAAGAAGGATGAGAAACCGAAACCTGGGCCGAGATCTGGCCGATACGCTTCTGAACCCCTTTGGAGGTTTGACCTCGCTCACCGAACAACCGACCGGACCTGGCTTTGGATTGCAGGATTCACTTAA
>DPOGS212938-PA
MLSSLRSGVKGLWRTSARSLQTTAKLQHDSLFVHRDSPEDNPSIPFEFTPENQKRADALLEIYPEGHKRAAMIPLLDLAQRQNGGWLPISAMHKVAELLNLPRMRVYEVATFYTMFIRRPIGKYHIQVCTTTPCWLRGSDTVLNAIKEATGCEVGGNSPCGKFSISEVECLGACVNAPMIQVNDDYYEDLTVEDSKEIINKLKKDEKPKPGPRSGRYASEPLWRFDLAHRTTDRTWLWIAGFT-