Monarch geneset OGS2.0

DPOGS212958
TranscriptDPOGS212958-TA1464 bp
ProteinDPOGS212958-PA487 aa
Genomic positionDPSCF300057 + 86168-93431
RNAseq coverage316x (Rank: top 36%)
Annotation
HeliconiusHMEL0107365e-13854.10% 
BombyxBGIBMGA001693-TA1e-10048.98% 
DrosophilaCG9772-PB5e-6437.66% 
EBI UniRef50UniRef50_B4NA317e-6241.98%GK11443 n=5 Tax=Drosophila RepID=B4NA31_DROWI
NCBI RefSeqXP_001359611.14e-6434.58%GA22024 [Drosophila pseudoobscura pseudoobscura]
NCBI nr blastpgi|1257774527e-6334.58%GA22024 [Drosophila pseudoobscura pseudoobscura]
NCBI nr blastxgi|1257774521e-6834.58%GA22024 [Drosophila pseudoobscura pseudoobscura]
Group
Gene OntologyGO:00055154.6e-06protein binding
KEGG pathwaydpo:Dpse_GA220241e-63 
 K03875 (SKP2, FBXL1)maps-> Small cell lung cancer
    Pathways in cancer
    Ubiquitin mediated proteolysis
    Cell cycle
InterPro domain[168-223] IPR0223642.7e-15F-box domain, Skp2-like
[181-221] IPR0018104.6e-06F-box domain, cyclin-like
Orthology groupMCL14337 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS212958-TA
ATGAATGTAAATAATATCGCAGAAGATCGTTTAGCTCCTGCTTTAGATGTTATTGAAAGTCCACGGAAAAGAATGCGCGTCGATAATTCCTCTCGCAAAAGCTGGAGTTTGATGGACAGAAGAACTGATTCTGATGTTCTCAATGAGATGGGTGTCAGTTTATTGGACCCGGAGGAGGAGCAATCAGAGCATAATGTGCAGAAATCATTAAAAAGAAAACACGACATAGAGAATGTTAATCCTAATGTGAACAGCGTGTCCCGGGGACGGTTCAGCCCCAGGTCCCCACTGAAGATGAGCCCCGGACCCTCTAAGGTACTGGCCAGGAGTCCACGCAGCTGTGATAAGGCCAAGCCGGATCTGGACTCGTCGCTGCCCCTGACATATGTCAATGATGAGGAGACGCCGCTCGGCCAATCGGTGGCCGTTTCGTGTAAACACGCGGCAAAACCTCACAACACCAGCAAGAAGGAAAACTATTTCGATTTGGCCCCCCCCGTGCCCAGCCCCCCCGCGGACGGAGGGGACTCCTTCCTGTCTCTATCAGACGAGGTGGTGCTGTCAGTGATGCGCTGGCTGCCGAAGAGGACGCTAGCTCACTGTATGCTGGTCTGCAAACGATGGCGTCGAATAGCCTCCGATGAGACCCTCTGGACCCGTCTGGACCTGGGGAACAAGACGCTCGCGGCGGGGGCCTTAGGAAAGGTCGTCAATAGGACTCCCATAGTACTGCGGCTGGCGGGGAGCGAGATAGGCGAATGGCATCCCGAGTCAGCTCCAGTACAAACAAGAATCCAGTATCTAGACCTGAGCATGTGCACCATAGACTATAGAACTCTTGAGAGTTTGCTCAGTCGGTGCTCAGGGCTCAAGAAACTCAGTCTGGAGAATGTTAAACTGAGCGAATACAGCCAGGAGTTGATTGGGAAATGCAGCGGCCTTGAAACCCTAAACCTGGCTATGGCTCAAGGCATCACAGCAACCGGACTGACTAACATACTAGAGGGCTGCCCCGGCTTGTCCTCGCTGAACATCTCCTGGTGTAACTTGAGCGAGGCGGCGCTGGAGGTGCTGGTGACGAGGCTGCCACAGAAGTTGAATGTCCAGGCATTGTCGTGTCGCTGCCCGCGCCTGCTGGAGCTGGACGTGTCGGACTGCTCTCGTCTCAGCGCCTGTTCGCTGAGCGCCCTGCTGCCTCTCACCCGCCTGGAACACCTGGCGCTCAGCCGCTGCTACCTGCTGCCGCCGCACGCGCTCACTAAGCTGTCTCGCATGTCCTCCCTTCAATTCGTGGAGGTGTGGGGGACTCTGCAGCACGCGTCCCTGGCGGCGCTGCGGGCAGCCCTGCCGGCGGTCACCATCAACCAGTTCATGTTTAGTATTAACGTGTGTCTGTCTGTGCAGCGCCATCGCCCGCCCAACGGTCGGCACGCGGCGGACATCGGTATGGGGTCTAAGGACTAG

Protein sequence:

>DPOGS212958-PA
MNVNNIAEDRLAPALDVIESPRKRMRVDNSSRKSWSLMDRRTDSDVLNEMGVSLLDPEEEQSEHNVQKSLKRKHDIENVNPNVNSVSRGRFSPRSPLKMSPGPSKVLARSPRSCDKAKPDLDSSLPLTYVNDEETPLGQSVAVSCKHAAKPHNTSKKENYFDLAPPVPSPPADGGDSFLSLSDEVVLSVMRWLPKRTLAHCMLVCKRWRRIASDETLWTRLDLGNKTLAAGALGKVVNRTPIVLRLAGSEIGEWHPESAPVQTRIQYLDLSMCTIDYRTLESLLSRCSGLKKLSLENVKLSEYSQELIGKCSGLETLNLAMAQGITATGLTNILEGCPGLSSLNISWCNLSEAALEVLVTRLPQKLNVQALSCRCPRLLELDVSDCSRLSACSLSALLPLTRLEHLALSRCYLLPPHALTKLSRMSSLQFVEVWGTLQHASLAALRAALPAVTINQFMFSINVCLSVQRHRPPNGRHAADIGMGSKD-