| DPOGS212961 | ||
|---|---|---|
| Transcript | DPOGS212961-TA | 483 bp |
| Protein | DPOGS212961-PA | 160 aa |
| Genomic position | DPSCF300057 + 136524-138204 | |
| RNAseq coverage | 0x (Rank: top 99%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010741 | 8e-36 | 61.26% | |
| Bombyx | BGIBMGA001725-TA | 8e-36 | 60.18% | |
| Drosophila | Irp-1B-PA | 1e-21 | 42.98% | |
| EBI UniRef50 | UniRef50_B7QCA1 | 8e-20 | 55.81% | RNA-binding translational regulator IRP, putative (Fragment) n=1 Tax=Ixodes scapularis RepID=B7QCA1_IXOSC |
| NCBI RefSeq | XP_972101.2 | 3e-32 | 48.61% | PREDICTED: similar to aconitase [Tribolium castaneum] |
| NCBI nr blastp | gi|15418786 | 1e-34 | 62.73% | iron regulatory protein 1 [Manduca sexta] |
| NCBI nr blastx | gi|15418786 | 2e-33 | 62.73% | iron regulatory protein 1 [Manduca sexta] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008152 | 4.5e-21 | metabolic process | |
| KEGG pathway | tca:660804 | 9e-32 | ||
| K01681 (ACO, acnA) | maps-> | Citrate cycle (TCA cycle) | ||
| Reductive carboxylate cycle (CO2 fixation) | ||||
| Glyoxylate and dicarboxylate metabolism | ||||
| InterPro domain | [18-116] IPR015934 | 4.5e-21 | Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase | |
| [18-116] IPR015937 | 4.5e-21 | Aconitase/isopropylmalate dehydratase | ||
| [55-117] IPR015931 | 2.3e-12 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | ||
| [31-116] IPR001030 | 1.4e-07 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS212961-TA
ATGAAGCGGTACATATTACACACACTATCCGAACAAAATAGACTTCTGGTTTTGTTTGAAGAAATACAATTTGTGAGTGAAAGCAGATCGCCAAATCCATACAGCGGGCTCCTGAAGAAATTGGAAGTTAATAATCAGAGCTTCAGTTACTTTGACATAACGCAGCTCGGCGCTAAATATGATCGTCTCCCATTTAGCGTGCGCGTTCTCCTCGAGTCCTGCGTCCGTAACTGCGACAATTTCCAGGTGTTGGAGAAGGATGTGAACAATGTGCTGGATTGGGAGAAGAACCAGGCCGTCGAGGGTGGAGTGGAAATAGCTTTCAAACCAGCTCGGGTCATTTTACAGAGCGTAGAGGACAGTTCTGAGGGTTTGAACCAGGAGAGGCAAGAGACTCCAACTTCAGACCTTGGCGCCCTCCCGGATTTGTCGCCCTGGGCCATCGCCCCATCACGGCCCCCCCCTAACGCCGGCACTGCTTGA
>DPOGS212961-PA
MKRYILHTLSEQNRLLVLFEEIQFVSESRSPNPYSGLLKKLEVNNQSFSYFDITQLGAKYDRLPFSVRVLLESCVRNCDNFQVLEKDVNNVLDWEKNQAVEGGVEIAFKPARVILQSVEDSSEGLNQERQETPTSDLGALPDLSPWAIAPSRPPPNAGTA-