Monarch geneset OGS2.0

DPOGS213018
TranscriptDPOGS213018-TA552 bp
ProteinDPOGS213018-PA183 aa
Genomic positionDPSCF300024 + 162262-201394
RNAseq coverage8506x (Rank: top 2%)
Annotation
HeliconiusHMEL0122993e-7897.92% 
BombyxBGIBMGA006937-TA1e-7193.71% 
DrosophilaTpnC73F-PA2e-6579.33% 
EBI UniRef50UniRef50_P479481e-6177.33%Troponin C, isoform 2 n=74 Tax=Bilateria RepID=TNNC2_DROME
NCBI RefSeqNP_001037594.11e-8198.68%troponin C [Bombyx mori]
NCBI nr blastpgi|1129830862e-8098.68%troponin C [Bombyx mori]
NCBI nr blastxgi|1129830862e-7998.68%troponin C [Bombyx mori]
Group
Gene OntologyGO:00055091.5e-41calcium ion binding
KEGG pathwaysmm:Smp_026560.21e-31 
 K02183 (CALM)maps-> Salivary secretion
    Olfactory transduction
    Alzheimer's disease
    Phototransduction - fly
    Glioma
    Phosphatidylinositol signaling system
    Insulin signaling pathway
    Neurotrophin signaling pathway
    Melanogenesis
    Oocyte meiosis
    Phototransduction
    GnRH signaling pathway
    Plant-pathogen interaction
    Long-term potentiation
    Gastric acid secretion
    Vascular smooth muscle contraction
    Calcium signaling pathway
InterPro domain[33-182] IPR0119921.5e-41EF-hand-like domain
[155-181] IPR0182483.1e-08EF-hand
[155-183] IPR0020483.3e-06Calcium-binding EF-hand
Orthology groupMCL13690 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213018-TA
ATGGCCAACGGTAGCAACCTTGGATCAACGCAGTGTTCTGGAGCCAAAATTGCGCAACACCAGGTCAAGGGTGGAAAGGCGCCGCCCTCAATTTTTGCTGATGAGCTCCCAGCAGAACAAATTGCCGTTCTTCGCAAAGCGTTCGATGGCTTCGACCACAACCGCTCGGGCAGTATCCCATGTGACTTCGTCGCTGACATCCTTCGAATGATGGGGCAGCCCTTTAACAAGAAGATCCTTGAGGAACTCATCGAAGAAGTTGATGCTGACAAGTCTGGTCGTCTGGAGTTCCCTGAATTCGTAACACTGGCCGCCAAATTCATCGTAGAAGAAGACGCTGAAGCCATGCAAAAGGAACTCAGGGAAGCATTCAGATTATACGACAAAGAAGGCAATGGTTACATTCCCACATCGAGCCTGCGTGAGATCCTGCGAGAACTGGACGAGCAGCTCACAGACGACGAGCTAGACGGTCTCATCCAAGAGATCGACACTGACGGCAGCGGTACCGTGGACTTCGATGAGTTCATGGAGATGATGACTGGGGAATAA

Protein sequence:

>DPOGS213018-PA
MANGSNLGSTQCSGAKIAQHQVKGGKAPPSIFADELPAEQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREILRELDEQLTDDELDGLIQEIDTDGSGTVDFDEFMEMMTGE-