DPOGS213018 | ||
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Transcript | DPOGS213018-TA | 552 bp |
Protein | DPOGS213018-PA | 183 aa |
Genomic position | DPSCF300024 + 162262-201394 | |
RNAseq coverage | 8506x (Rank: top 2%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL012299 | 3e-78 | 97.92% |   |
Bombyx | BGIBMGA006937-TA | 1e-71 | 93.71% |   |
Drosophila | TpnC73F-PA | 2e-65 | 79.33% |   |
EBI UniRef50 | UniRef50_P47948 | 1e-61 | 77.33% | Troponin C, isoform 2 n=74 Tax=Bilateria RepID=TNNC2_DROME |
NCBI RefSeq | NP_001037594.1 | 1e-81 | 98.68% | troponin C [Bombyx mori] |
NCBI nr blastp | gi|112983086 | 2e-80 | 98.68% | troponin C [Bombyx mori] |
NCBI nr blastx | gi|112983086 | 2e-79 | 98.68% | troponin C [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005509 | 1.5e-41 | calcium ion binding | |
KEGG pathway | smm:Smp_026560.2 | 1e-31 |   | |
  | K02183 (CALM) | maps-> | Salivary secretion | |
  |   |   | Olfactory transduction | |
  |   |   | Alzheimer's disease | |
  |   |   | Phototransduction - fly | |
  |   |   | Glioma | |
  |   |   | Phosphatidylinositol signaling system | |
  |   |   | Insulin signaling pathway | |
  |   |   | Neurotrophin signaling pathway | |
  |   |   | Melanogenesis | |
  |   |   | Oocyte meiosis | |
  |   |   | Phototransduction | |
  |   |   | GnRH signaling pathway | |
  |   |   | Plant-pathogen interaction | |
  |   |   | Long-term potentiation | |
  |   |   | Gastric acid secretion | |
  |   |   | Vascular smooth muscle contraction | |
  |   |   | Calcium signaling pathway | |
InterPro domain | [33-182] IPR011992 | 1.5e-41 | EF-hand-like domain | |
[155-181] IPR018248 | 3.1e-08 | EF-hand | ||
[155-183] IPR002048 | 3.3e-06 | Calcium-binding EF-hand | ||
Orthology group | MCL13690 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213018-TA
ATGGCCAACGGTAGCAACCTTGGATCAACGCAGTGTTCTGGAGCCAAAATTGCGCAACACCAGGTCAAGGGTGGAAAGGCGCCGCCCTCAATTTTTGCTGATGAGCTCCCAGCAGAACAAATTGCCGTTCTTCGCAAAGCGTTCGATGGCTTCGACCACAACCGCTCGGGCAGTATCCCATGTGACTTCGTCGCTGACATCCTTCGAATGATGGGGCAGCCCTTTAACAAGAAGATCCTTGAGGAACTCATCGAAGAAGTTGATGCTGACAAGTCTGGTCGTCTGGAGTTCCCTGAATTCGTAACACTGGCCGCCAAATTCATCGTAGAAGAAGACGCTGAAGCCATGCAAAAGGAACTCAGGGAAGCATTCAGATTATACGACAAAGAAGGCAATGGTTACATTCCCACATCGAGCCTGCGTGAGATCCTGCGAGAACTGGACGAGCAGCTCACAGACGACGAGCTAGACGGTCTCATCCAAGAGATCGACACTGACGGCAGCGGTACCGTGGACTTCGATGAGTTCATGGAGATGATGACTGGGGAATAA
>DPOGS213018-PA
MANGSNLGSTQCSGAKIAQHQVKGGKAPPSIFADELPAEQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDADKSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREILRELDEQLTDDELDGLIQEIDTDGSGTVDFDEFMEMMTGE-