| DPOGS213054 | ||
|---|---|---|
| Transcript | DPOGS213054-TA | 687 bp |
| Protein | DPOGS213054-PA | 228 aa |
| Genomic position | DPSCF300016 - 1268543-1271076 | |
| RNAseq coverage | 243x (Rank: top 43%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010319 | 9e-125 | 90.79% | |
| Bombyx | BGIBMGA007672-TA | 2e-77 | 79.25% | |
| Drosophila | Rab9-PA | 5e-67 | 55.40% | |
| EBI UniRef50 | UniRef50_Q9VIW6 | 7e-65 | 55.40% | RE17845p n=19 Tax=Coelomata RepID=Q9VIW6_DROME |
| NCBI RefSeq | XP_970524.1 | 1e-70 | 60.85% | PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] |
| NCBI nr blastp | gi|91085159 | 2e-69 | 60.85% | PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] |
| NCBI nr blastx | gi|91085159 | 1e-68 | 60.85% | PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.4e-71 | small GTPase mediated signal transduction | |
| GO:0005525 | 1.4e-71 | GTP binding | ||
| GO:0015031 | 1.4e-71 | protein transport | ||
| GO:0016020 | 4.1e-26 | membrane | ||
| GO:0007165 | 4.1e-26 | signal transduction | ||
| GO:0006184 | 4.1e-26 | GTP catabolic process | ||
| GO:0003924 | 4.1e-26 | GTPase activity | ||
| GO:0005622 | 1.1e-16 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [19-189] IPR003579 | 1.4e-71 | Small GTPase superfamily, Rab type | |
| [20-184] IPR001806 | 2.9e-54 | Small GTPase superfamily | ||
| [20-181] IPR005225 | 2.9e-27 | Small GTP-binding protein domain | ||
| [16-189] IPR020849 | 4.1e-26 | Small GTPase superfamily, Ras type | ||
| [21-191] IPR003578 | 1.1e-16 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL11667 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213054-TA
ATGGTCGAGGATAATGATCAAAGTTACGGGAGGAACGCAAATAAAAGCGTTCTTTTAAAAATTGTGATCCTCGGCGACGGAGGCGTTGGTAAATCATGTTTAATGAGTAGATTTATATCGAATCACTTCGACGACCACAACTTTCACACGATAGGTGTGGAGTTCATGAACAAAATGATAGAAGTCGGAGGCAAACAATATACTTTACAGATCTGGGACACAGCTGGACAGGAAAGATTCAAGTCTCTCAGGACTCCGTTCTACAGAGGAACGGACATTTGTATTTTAGCATACGCCATAGACGACAGGAGTTCTTTCAACAATATTAAAACATGGCTGAATGAGTTTCTTAATTATGCTGGTGTCAAAAATGGAATCGAGAAATTCCCATTCATAGTTGTTGGAAATAAGTCAGATGTATCGTCCAAAGATAGGGAGGTACCATATGAACAATTGAAGCAGTGGTGTGAAGAAAATAAAATATCGACATATCTGGAGACCTCCGCTAAGACAGACAATAATGTTCTCGAAGCATTCTCATTATCGGTGCAAAGATGGGCTGATCTAGAACAGAAGGCAGAAAAAGAGCTCCGGATGTACCACCATCCGGACACCGTCACATTGCATGGATCCAACAATGTGTCCGGCTTCAGAGCAACCTGCTGTTCGCGATTCACTAGTTTGTGA
>DPOGS213054-PA
MVEDNDQSYGRNANKSVLLKIVILGDGGVGKSCLMSRFISNHFDDHNFHTIGVEFMNKMIEVGGKQYTLQIWDTAGQERFKSLRTPFYRGTDICILAYAIDDRSSFNNIKTWLNEFLNYAGVKNGIEKFPFIVVGNKSDVSSKDREVPYEQLKQWCEENKISTYLETSAKTDNNVLEAFSLSVQRWADLEQKAEKELRMYHHPDTVTLHGSNNVSGFRATCCSRFTSL-