Monarch geneset OGS2.0

DPOGS213132
TranscriptDPOGS213132-TA2862 bp
ProteinDPOGS213132-PA953 aa
Genomic positionDPSCF300016 + 688437-721521
RNAseq coverage81x (Rank: top 64%)
Annotation
HeliconiusHMEL0135791e-10256.32% 
BombyxBGIBMGA007891-TA0.080.59% 
DrosophilaRapgap1-PD4e-5535.91% 
EBI UniRef50UniRef50_A0ND247e-16544.91%AGAP002573-PA n=6 Tax=Endopterygota RepID=A0ND24_ANOGA
NCBI RefSeqXP_967718.20.047.50%PREDICTED: similar to GTPase activating Rap/RanGAP domain-like 3, partial [Tribolium castaneum]
NCBI nr blastpgi|1892416730.047.50%PREDICTED: similar to GTPase activating Rap/RanGAP domain-like 3, partial [Tribolium castaneum]
NCBI nr blastxgi|1892416730.047.37%PREDICTED: similar to GTPase activating Rap/RanGAP domain-like 3, partial [Tribolium castaneum]
Group
Gene OntologyGO:00056223.2e-59intracellular
GO:00510563.2e-59regulation of small GTPase mediated signal transduction
GO:00050963.2e-59GTPase activator activity
GO:00050833e-26small GTPase regulator activity
KEGG pathwaymcc:7159582e-52 
 K08013 (SIPA1)maps-> Leukocyte transendothelial migration
InterPro domain[213-398] IPR0003313.2e-59Rap/ran-GAP
[555-778] IPR0011803e-26Citron-like
Orthology groupMCL15087 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213132-TA
ATGGTTTATAAACACATTAAGAGTGCTCTTGTTATTGTCCCCAGCTCTTCAGCGAGTGAACTCATCTCACGACGCGGCGTCTTCTCTCGCAGACAGTATGGCTCCGTGGAACAGCTCTCAGCGCCGGGGGACGGCGGAGCGGCGGACGCTATAGTACGGCGATATCGTCTTGAAAATGGAAATTCTCTGGGGGAGAAAGACGAGTTATTCGGGCCGCCCAGCGCTCCGGTTCTAGAAAATCCAGAATTCCAAACGCGATGGTACTTCAAGTATTTTCTTGGCAAAATGCATCAAAACTATATTGGAGTGGACGGCGCGAGAGAACCGTACCTCTTGAGCGTAGTGCAGGAGGGCGCGGGTCTTTTACGAGCTATTCTCTTCAATAAAATGGGTGCTCACAAAATATATCTTCCTGCGAGCGCATGGAGCGGCGGTGGCGGTCAAACTCCAACCAGACCTACCCTCAAGCAGATTTTAGCACAATTCACTTCCATCGAACGAATTGACAAAATGCCTAGAGAGATAACATGCCCGGAATTACAAAAAGATATTTTGCTGCTCGAAGAACAGGAAGGCTCCGTGAATTTTAAAATAGGCGTCATGATAATGAAGCCCGGTCAGAAGACTGATGACGAAATGCTGTCAAACGAGAAGGGCGACGAGAAATGGGACCGATTCATTTCACTTTTAGGAGACAAGATTCGATTAAGAGGCTGGAATCGCTTTCGTGGTGGTCTCGATGTTAAAGGCGACATGACCGGCAGCCATTCAATTTACACTATGCACCAAGGACACGAAATAATGTTCCATATTTCAACAATGTTGCCATTTTCAAAAGATAACAAACAACAGCTGGAACGAAAACGTCACATCGGCAACGATATAGTGAATATAATTTTCACTGAAGACTCAACTCACAACACGTTCAACCCCCAGTGTGTGAAAAGCCATTTCACTCACATTTTTGCAGTGGTATCTGTGGTTGAAGGGGAGGGGTACAGGTTGAGTGTGTACACAGACGATACTGTACCTCCGTTTGGGCCGTCCTTACCTTGCCCGCCCATCTTCAACGACCCACAGTTGTTCAGGGAATTTCTTCTAGTAAAATTAATGAACGGTGAAAAGGCCGCATTCCAAACACCTACATTTGCTTTGAAACGGCAAAGGACTCTAGACACATTGATAAGAGATATATACGCAGAGCATTGTTCGGACCATAAAGTGCCAATGCTCTCTCGTCGTGCGTTGTCTGATGTGTGGTCGGGCGGCGCTGGTGCTGGCGGGGCGGGCGCAGCACGCACCGAACGTTTTCTTCATGTTGGACAAGCTCTTAAGCTAGACGCAGTATTGAGAGGTGACGCGCCAACCAGCTTGGTATCCAGCGGGAGCGGAGGCTCTCGTCGTGCCCCTTGGGAAGGTCGTCTATGGCGTGCGGCTCCATTGCCAGCCACGCCGGTCTGTGCAGAGCAACTTGCTGAGGGACGGCTGCTACTCTCCACAACATCAAATACTTACATATTAGAAGAAAGCGGAACAACAAAAGTAGTTCTCCGCTGGGAGGGGTGCGTGCGCTCTGCGAGGGTAACAGAGCGTGCTGGTCTGTTCCGAGTGGGGGCTCGGGTGTCGATAGGAGGCGGATCTGCGACCGGCGGCGCCGGGGGAGCCGGGTTGTATGCGCTACCCTTACCAGAATTGTGTGCCGGAGCCTGGGCCATGCGTCCACTACAGGACTGCAAGCATGCGAGATTACCCAGGACTAAAACTGCACATTTCTTCGATGTCCTTGAACAAGGTGAGGGTGGAAAAACTTTTCTAGCCGTGGCGATTGGAAGAAGAATTCTCTTGATGATAGAAGAAGCGAATCCCGATCACGAGATGGGATTTGAATATACCCACGTCAAGGATATACAACTGGGTGAATCTCCCACACTAATAAAATTAATTGACAATGAGGTCGGAGTTTTGGTTGTTGGGTATAAACACCATTGGGACGTTCTCGAAATGAATACAACACAGACGATAAAAAGAGCCGAAGGCTCAGAAGACTGTGGTCCACAGCGCGGGACGCTGGTCAACGCATTACGCATTGGTGATGATAGGGATGGACAAATAATATTGTGTTATAATCACACATGTCACTTTGAGAGATTAACTTCAAAGGGCCTAGAGAGTGATATAGAATATGACTTCCACTGGACGACGGTTCCTACAGCTGTTGTCTGCGCTTTCCCTTACATTATGGCATTTGCTGAAGACTTGTTAGAAATCCGATTGGTAGCTAATGGATCATTGGTACACGCTGCCTGCATACCGGGACTTAAAATCCTTTGCGGCCGACGAGACATATTCTACGTGGCTTGTGCCCCTGAGTACGTTCCCTTATCCCGGGAAGTGGATCCCTGCTTCTCGCTACATGACAGCTACGAGCTGGTGCGGCATATCAATAAAGCCGGATACTCCATCGATGACGAAGACACAGAGAAGTGCGATCCCAGCCTAAACAATCGGACCCCTGAAAACAACTCCGCTTCAAGTCGCAGCAGCTCTATTTCCTCGGAACAGGAGAATATTCGTCCTCCACTTCAGAGAATGACTCCCATTTCTCCACCGACGTCACCGCAAGTACTTCCTGAGAATAGCGGCCGGTGCGTTCGTATATACAAGATCCCGCAGAGCAATCTCAGCGCCGCCACTTACCAGCGACAGTCCGTGTCCGCTGACCAGGTCGTCACATCATATTTCTCCGACAGACCAAACAGTATTAGACAAAGACTCGCAGAATTAAGACTGGACAGCAAGTCAAGAGGTGGTGGTGACGAAGAGTCTTTAGATATTTCAAATTATCAACCGACCATGCCCTAA

Protein sequence:

>DPOGS213132-PA
MVYKHIKSALVIVPSSSASELISRRGVFSRRQYGSVEQLSAPGDGGAADAIVRRYRLENGNSLGEKDELFGPPSAPVLENPEFQTRWYFKYFLGKMHQNYIGVDGAREPYLLSVVQEGAGLLRAILFNKMGAHKIYLPASAWSGGGGQTPTRPTLKQILAQFTSIERIDKMPREITCPELQKDILLLEEQEGSVNFKIGVMIMKPGQKTDDEMLSNEKGDEKWDRFISLLGDKIRLRGWNRFRGGLDVKGDMTGSHSIYTMHQGHEIMFHISTMLPFSKDNKQQLERKRHIGNDIVNIIFTEDSTHNTFNPQCVKSHFTHIFAVVSVVEGEGYRLSVYTDDTVPPFGPSLPCPPIFNDPQLFREFLLVKLMNGEKAAFQTPTFALKRQRTLDTLIRDIYAEHCSDHKVPMLSRRALSDVWSGGAGAGGAGAARTERFLHVGQALKLDAVLRGDAPTSLVSSGSGGSRRAPWEGRLWRAAPLPATPVCAEQLAEGRLLLSTTSNTYILEESGTTKVVLRWEGCVRSARVTERAGLFRVGARVSIGGGSATGGAGGAGLYALPLPELCAGAWAMRPLQDCKHARLPRTKTAHFFDVLEQGEGGKTFLAVAIGRRILLMIEEANPDHEMGFEYTHVKDIQLGESPTLIKLIDNEVGVLVVGYKHHWDVLEMNTTQTIKRAEGSEDCGPQRGTLVNALRIGDDRDGQIILCYNHTCHFERLTSKGLESDIEYDFHWTTVPTAVVCAFPYIMAFAEDLLEIRLVANGSLVHAACIPGLKILCGRRDIFYVACAPEYVPLSREVDPCFSLHDSYELVRHINKAGYSIDDEDTEKCDPSLNNRTPENNSASSRSSSISSEQENIRPPLQRMTPISPPTSPQVLPENSGRCVRIYKIPQSNLSAATYQRQSVSADQVVTSYFSDRPNSIRQRLAELRLDSKSRGGGDEESLDISNYQPTMP-