| DPOGS213133 | ||
|---|---|---|
| Transcript | DPOGS213133-TA | 540 bp |
| Protein | DPOGS213133-PA | 179 aa |
| Genomic position | DPSCF300016 + 729118-729859 | |
| RNAseq coverage | 98x (Rank: top 61%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013581 | 3e-71 | 68.72% | |
| Bombyx | BGIBMGA007892-TA | 6e-66 | 63.13% | |
| Drosophila | mRpL30-PA | 7e-45 | 53.52% | |
| EBI UniRef50 | UniRef50_Q9W4I3 | 8e-43 | 53.52% | FI01736p n=15 Tax=Diptera RepID=Q9W4I3_DROME |
| NCBI RefSeq | XP_002022799.1 | 1e-44 | 49.71% | GL14759 [Drosophila persimilis] |
| NCBI nr blastp | gi|125982817 | 2e-43 | 49.71% | GA20051 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastx | gi|195398847 | 1e-44 | 51.41% | GJ15858 [Drosophila virilis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 2e-09 | ribosome | |
| GO:0006412 | 2e-09 | translation | ||
| GO:0003735 | 2e-09 | structural constituent of ribosome | ||
| KEGG pathway | ||||
| InterPro domain | [50-110] IPR016082 | 2e-09 | Ribosomal protein L30, ferredoxin-like fold domain | |
| Orthology group | MCL11421 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213133-TA
ATGAACAAGCAACTGCTTAAACCAATCACTCCACTTATATCTCTATCTAGATCAAGAGGTTATAAGCCTCCAGGAGGAATTAGATATCCAGGCGGAATTACTTTTTATCCGAGACATCCAAACCACAAGGACCCTGAATATACACCAACAAAGCTATTTCGAGTAGAACAGATAAAATCTAGTAAATTTCATCCATGGTGGGAGAAAAAAATCTTAGAAGAACTAAAAGTGGATATGTTTCAGAGTAAAGTTGCTATTGTCAAAAATATACCCGAAATGAATGCCAAGTTATGGAAAGTTAAACATTTAATCAAAGTAACACCTATCACTTTCCCATATGGTGAACCAAAAGAAGAGGATATAAAGTATACTAAACTGAGAGAAAATGGGGAATGCATTGTAACAAAGACTTTACAGCCCAATGAGAAACAATTAGAGGCTTTAGAATCTTTTGAAAAGAACCCAAGGAAAATGGATTCAGAAACAATTAAGAGGGATACCAGGTTTAAATGGAATAATGCATTCACTGGTGGATTTTAA
>DPOGS213133-PA
MNKQLLKPITPLISLSRSRGYKPPGGIRYPGGITFYPRHPNHKDPEYTPTKLFRVEQIKSSKFHPWWEKKILEELKVDMFQSKVAIVKNIPEMNAKLWKVKHLIKVTPITFPYGEPKEEDIKYTKLRENGECIVTKTLQPNEKQLEALESFEKNPRKMDSETIKRDTRFKWNNAFTGGF-