DPOGS213143 | ||
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Transcript | DPOGS213143-TA | 567 bp |
Protein | DPOGS213143-PA | 188 aa |
Genomic position | DPSCF300016 + 1022940-1024510 | |
RNAseq coverage | 448x (Rank: top 27%) |
Annotation | ||||
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Heliconius | HMEL010345 | 1e-54 | 66.18% |   |
Bombyx | BGIBMGA007902-TA | 9e-34 | 44.16% |   |
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_UPI00021A6C1E | 1e-11 | 52.31% | UPI00021A6C1E related cluster n=3 Tax=unknown RepID=UPI00021A6C1E |
NCBI RefSeq | XP_001608250.1 | 5e-11 | 52.63% | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] |
NCBI nr blastp | gi|340711632 | 4e-11 | 52.31% | PREDICTED: hypothetical protein LOC100643357 [Bombus terrestris] |
NCBI nr blastx | gi|350405835 | 2e-12 | 52.31% | PREDICTED: hypothetical protein LOC100749713 [Bombus impatiens] |
Group | ||||
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Gene Ontology | GO:0008061 | 4.9e-12 | chitin binding | |
GO:0006030 | 4.9e-12 | chitin metabolic process | ||
GO:0005576 | 4.9e-12 | extracellular region | ||
KEGG pathway |   | |||
InterPro domain | [127-180] IPR002557 | 4.9e-12 | Chitin binding domain | |
Orthology group | MCL25402 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213143-TA
ATGTGGACTTTTACAGTACTTCTGGTTTTTACAGCGATATGCGGAACCAATAGTGAACCAGTTTGGAGCAAGCCGACTGAAAAAAGTATAAGACAAAAACGACTGCTCTTTTACGATGAACAAGGTCAATTAGTGAAAACCTATGGAAGCCCTTTATATCATTTTGGTCACCGGGAACAAGAAAATTTGTTTCACTGGAGTTTCTTGAACATGTTTCTAAGTCCAGTATTTCCGACAACGCTAGGCAGGAATTCCATTACATACATGGTCCCAGTATCCGACGCAGTAATACATCAGATCGATAAGGATCCGTTCTATCAGAATAAAGTCTTCGTACTCACGTATAAGGATCCAGTAGTAGAGACAAATCCTCTCTGCGCTGGTAAGAGAACCCAAATTCCGTCCCCAAAAATGTGCAACAACTTCCTGAATTGCTGGGACGGCTGGGCCGTCGAGCAGGAATGCCCCGCAGATCTTCTGTTCTCTTCTGAAGGCTTCTGCGATTATCCTTATAACGTCGACTGTAATAATAGAAAAGTACCAGGTATGTTACATGCTTGTATTTAA
>DPOGS213143-PA
MWTFTVLLVFTAICGTNSEPVWSKPTEKSIRQKRLLFYDEQGQLVKTYGSPLYHFGHREQENLFHWSFLNMFLSPVFPTTLGRNSITYMVPVSDAVIHQIDKDPFYQNKVFVLTYKDPVVETNPLCAGKRTQIPSPKMCNNFLNCWDGWAVEQECPADLLFSSEGFCDYPYNVDCNNRKVPGMLHACI-