Monarch geneset OGS2.0

DPOGS213164
TranscriptDPOGS213164-TA1728 bp
ProteinDPOGS213164-PA575 aa
Genomic positionDPSCF300114 - 487848-489575
RNAseq coverage1985x (Rank: top 6%)
Annotation
HeliconiusHMEL0161721e-1024.65% 
BombyxBGIBMGA007349-TA0.095.14% 
DrosophilaHsp60-PA0.082.21% 
EBI UniRef50UniRef50_P108090.074.69%60 kDa heat shock protein, mitochondrial n=2607 Tax=cellular organisms RepID=CH60_HUMAN
NCBI RefSeqXP_001600045.10.084.55%PREDICTED: similar to ENSANGP00000014839 [Nasonia vitripennis]
NCBI nr blastpgi|2539931960.094.79%heat shock protein 60 [Chilo suppressalis]
NCBI nr blastxgi|2539931960.094.92%heat shock protein 60 [Chilo suppressalis]
Group
Gene OntologyGO:00420262.6e-216protein refolding
GO:00057372.6e-216cytoplasm
GO:00442673.4e-74cellular protein metabolic process
GO:00055243.4e-74ATP binding
KEGG pathwaynvi:1001140310.0 
 K04077 (groEL, HSPD1)maps-> Type I diabetes mellitus
    RNA degradation
InterPro domain[1-575] IPR0024230Chaperonin Cpn60/TCP-1
[25-550] IPR0018442.6e-216Chaperonin Cpn60
Orthology groupMCL10648 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213164-TA
ATGTTGCGCTTGCCTCGGGTTGTTCGTCAAACTCTTTCCCTTCAGAAGAGCCATCAGCTTTCAAGATTTTATGCCAAAGATGTGAGGTTTGGTGCTGATGTAAGAGCTCTCATGCTCCAGGGCGTCGATATTCTTGCCGATGCAGTAGCCGTTACCATGGGCCCAAAAGGTAGGAACGTTATATTGGAACAGTCCTGGGGTTCACCTAAAATAACCAAAGATGGTGTAACCGTTGCGAAAGGTGTGGAGTTGAAAGATAAATTTCAGAATATCGGTGCCAAACTTGTACAAAATGTCGCAAATAACACCAATGAAGAAGCCGGTGACGGCACCACCACAGCCACCGTACTCGCCCGTGCTATTGCCAAAGAAGGTTTCGAAAAGATTTCAAAAGGTGCCAATCCGATCGAAATTCGCCGTGGGGTCATGTTAGCCGTAGATGCTGTCAAAGATAAGTTGAAGAACATGTCCAAGCCCGTTACCACACCCGAAGAGATCGCACAGGTCGCAACGATCTCTGCTAACGGTGACCTCGCCATCGGTAAACTCATCGCCGACGCAATGAAGAAGGTCGGTCGTGACGGCGTCATTACAGTGAAGGACGGCAAGACATTGTACGACGAATTGGAAGTTATCGAAGGTATGAAATTCGATAGAGGTTATATTTCACCATACTTCATCAACTCGTCCAAGGGTGCTAAAGTCGAGTTCCAGGATGCTCTAGTTCTGTTTTCTGAGAAGAAAATCAGCAATGTGCAGACAATCATTCCGGCTTTGGAACTCGCGAACAGCCAAAGGAAGCCACTAGTCATTATAGCTGAAGATGTTGATGGTGAAGCTCTTTCGACGTTGGTTGTTAACAGACTAAAGATTGGCTTGCAGGTTGCCGCTGTTAAAGCTCCAGGTTTCGGTGACAACAGAAAAGCTACTCTTAGTGATATGGCAATCTCTACTGGTGGTGTCGTGTTTGGTGATGAAGCCAACCTCATTAAGATTGAAGATGTTCAACTCTCAGACCTCGGCCAGGTTGGTGAAGTCATCATCACGAAGGATGACACACTCATTCTTAAAGGTAAAGGCAAAAAGGCTGACATTGACAGGCGTGCTGAACAAATCCGTGATCAAATCCAGGAGACCAACTCTGAGTATGAGAAGGAAAAATTACAAGAACGTCTTGCCAGGTTGGCCTCTGGTGTGGCCGTGTTACATGTTGGAGGCTCCAGTGAAGTAGAGGTCAACGAGAAGAAGGATCGTGTAAATGATGCCCTGAATGCTACCCGTGCTGCTGTGGAAGAAGGTATTGTTCCTGGAGGTGGATCTGCTCTCCTCAGATGCATCCCAACTCTCGAGGCATTAAAAACATCCAACTCTGACCAGGCTACTGGAGTAGAAATCATCAAAAAAGCATTAAAAATGCCCTGCATGACCATCGCACGCAATGCTGGCATTGACGGTTCAGTTGTAGTAGCTAAAGTAGAAGATCTCGGTCCCGAGTTTGGTTATGACGCTCTCAACAATGAATATGTCAACATGATTGAGAAAGGCATCATCGATCCAACCAAAGTTGTCAGAACAGCACTCACCGATGCCAGTGGGGTTGCATCACTCTTAACCACAGCGGAGGCGGTGATCTGTGAGATACCCCAAGAGAAGGAAGCCAACCCCATGGCCGGTATGGGAGGCATGGGAGGCATGGGCGGCATGGGGGGTATGGGAGGTATGATGTAA

Protein sequence:

>DPOGS213164-PA
MLRLPRVVRQTLSLQKSHQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKDKLKNMSKPVTTPEEIAQVATISANGDLAIGKLIADAMKKVGRDGVITVKDGKTLYDELEVIEGMKFDRGYISPYFINSSKGAKVEFQDALVLFSEKKISNVQTIIPALELANSQRKPLVIIAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLSDMAISTGGVVFGDEANLIKIEDVQLSDLGQVGEVIITKDDTLILKGKGKKADIDRRAEQIRDQIQETNSEYEKEKLQERLARLASGVAVLHVGGSSEVEVNEKKDRVNDALNATRAAVEEGIVPGGGSALLRCIPTLEALKTSNSDQATGVEIIKKALKMPCMTIARNAGIDGSVVVAKVEDLGPEFGYDALNNEYVNMIEKGIIDPTKVVRTALTDASGVASLLTTAEAVICEIPQEKEANPMAGMGGMGGMGGMGGMGGMM-