DPOGS213170 | ||
---|---|---|
Transcript | DPOGS213170-TA | 708 bp |
Protein | DPOGS213170-PA | 235 aa |
Genomic position | DPSCF300114 - 340592-341416 | |
RNAseq coverage | 293x (Rank: top 38%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL002988 | 5e-116 | 85.11% |   |
Bombyx | BGIBMGA007359-TA | 3e-105 | 78.48% |   |
Drosophila | e(y)1-PA | 4e-54 | 54.26% |   |
EBI UniRef50 | UniRef50_E2B8Z4 | 2e-68 | 54.92% | Transcription initiation factor TFIID subunit 9 n=11 Tax=Pancrustacea RepID=E2B8Z4_HARSA |
NCBI RefSeq | XP_001652244.1 | 3e-66 | 55.08% | tbp-associated factor [Aedes aegypti] |
NCBI nr blastp | gi|307211901 | 8e-68 | 54.92% | Transcription initiation factor TFIID subunit 9 [Harpegnathos saltator] |
NCBI nr blastx | gi|307211901 | 5e-67 | 54.92% | Transcription initiation factor TFIID subunit 9 [Harpegnathos saltator] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006352 | 8.6e-76 | transcription initiation, DNA-dependent | |
GO:0003677 | 7.2e-30 | DNA binding | ||
KEGG pathway | aag:AaeL_AAEL006789 | 7e-66 |   | |
  | K03133 (TFIID7, TAF9) | maps-> | Basal transcription factors | |
InterPro domain | [14-141] IPR003162 | 8.6e-76 | Transcription factor TAFII-31 | |
[17-84] IPR009072 | 7.2e-30 | Histone-fold | ||
Orthology group | MCL11398 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS213170-TA
ATGTCTGAAAAGGAGAAATCAAAAGTAAACACGCAATCAAAACATTTACCTAAAGATGCACAAGTGATCATGTCGATCATGAAGGAAATAGGAATCACCGACTACGAACCAAGGGTGTTGAATCAGCTCTTGGAGTTCACTTACAGATACGTTACATCAGTATTGGAGGATGCGCGCGTTTTTGCAAATCACGCTAAAAAGAAAAACATAGATCTCGACGATGTCAGGCTCGCGGTTCAGATGCAACTGGACAAGTCCTTCACAAGCCCACCTCCGAGGGAAGTGTTGTTAGAACTGGCCAGAGTTAAAAATGTCAATCCACTTCCTTTGGTGAAACCGCATTGTGGATTACGATTGCCGCCAGATCGTTATTGTCTGTCATCTTGTAATTATCGACTTAAACAGGCGACTAAGAAAATAGTAGCGAAAGCGTCTATACCAGCAGCCCCAACCATCAAAACGGTCACCACACCTAAACCCCCTGGACAAAATGTCGTGGTGAAAAGGCCCACCGGTGCTATTGTTAATGTGACCTCTAAACCGACTTCAGTACCAAAGCCCGTGTTGAAGTTTACTTCCAGTAGCAAGGTGGTTGCCAAACCAGCAGTCAGGGTAACTGCAGGACCTTCATCCCAAGGACCAGTCAAGATGGAAGTCGACGAGGTCTCACACAAACGGAAAAGGGATGAAGATGATTATGACATGTAG
>DPOGS213170-PA
MSEKEKSKVNTQSKHLPKDAQVIMSIMKEIGITDYEPRVLNQLLEFTYRYVTSVLEDARVFANHAKKKNIDLDDVRLAVQMQLDKSFTSPPPREVLLELARVKNVNPLPLVKPHCGLRLPPDRYCLSSCNYRLKQATKKIVAKASIPAAPTIKTVTTPKPPGQNVVVKRPTGAIVNVTSKPTSVPKPVLKFTSSSKVVAKPAVRVTAGPSSQGPVKMEVDEVSHKRKRDEDDYDM-